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Protein Overview: lsm-4

General Information:
Name(s) found: lsm-4 / CE01277 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00003078 locus:lsm-4 Probable U6 snRNA-associated Sm-like protein LSm4 status:Confirmed UniProt:Q19952 protein_id:CCD66279.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 123 amino acids

    Gene Ontology:
    Cellular Component: ribonucleoprotein complex [IEALink to PubMed article]
    Biological Process: mRNA metabolic process [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLPLSLLKT AQNHPMLVEL KNGETYNGHL KACDSWMNIH LVDVIFTSKD GDKFFKMSEA  60
   61 YVRGSTIKYL RIPETVVDLV KTEVNEVRRQ QQREQSRGRG GGRGGRGGHR GGGGNRGGRG 120
  121 GAR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] PSI-BLAST 19.045757 D1 core SNRNP protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle