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Protein Overview: gly-1

General Information:
Name(s) found: gly-1 / CE01002 [WormBase]
Description(s) found:
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  • WBGene00001626 locus:gly-1 status:Confirmed UniProt:G5ECK8 protein_id:CAA85457.1 [WormBase]
  • pir||T22188 hypothetical protein F44F4.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3877061|emb|CAA85457.1| C. elegans protein F44F4.6, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17534671|ref|NP_496345.1| hypothetical protein F44F4.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|15375036|gb|AAK94758.1| GLY-1 [Caenorhabditis elegans] [NCBI NR]
  • gi|15375034|gb|AAK94757.1| GLY-1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE01002 WBGene00001626 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed TR:Q20406 protein_id:CAA85457.1 [wormpep150.fasta]
  • 01002 WBGene00001626 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed TR:Q20406 protein_id:CAA85457.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • GLYcosylation related, Serpentine Receptor, class A (alpha) (55.4 kD) (gly-1) [Caenorhabditis elegans]gi|3877061|emb|CAA85457.1| Hypothetical protein F44F4.6 [Caenorhabditis elegans]gi|15375036|gb|AAK94758.1| GLY-1 [Caenorhabditis elegans]gi|15375034|g [nrdb_11152004_Chlamydomonas]
  • locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed TR:Q20406 protein_id:CAA85457.1 [wormpep115.fasta.reversed]
  • CE01002 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed TR:Q20406 protein_id:CAA85457.1 [wormpep80.hongbin]
  • CE01002 WBGene00001626 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed UniProt:Q20406_CAEEL protein_id:CAA85457.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01002 WBGene00001626 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed UniProt:Q20406_CAEEL protein_id:CAA85457.1| [wormORF-contam.fasta]
  • Hypothetical protein F44F4.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • GLY-1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F44F4.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01002 WBGene00001626 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed UniProt:Q20406 protein_id:CAA85457.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01002 WBGene00001626 locus:gly-1 beta-1,6-N-acetylglucosaminyltransferase status:Confirmed UniProt:G5ECK8 protein_id:CAA85457.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE01002 WBGene00001626 locus:gly-1 status:Confirmed UniProt:G5ECK8 protein_id:CAA85457.1 [wormpep246-ecoli-contam.fasta]
  • GLY-1 OS=Caenorhabditis elegans GN=gly-1 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 472 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: acetylglucosaminyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKHPKTIR NLFRLKFCCL QLGMNVRRFK IISQFLYSSF TVYIVLRLGF VDYSLVPENR  60
   61 KLENIPLECN SVINGTENRR KISRARQWDW HFDWVEHEIF NSRNVCSTID KYFNFTRIPS 120
  121 SREEAEYPLA YGLVVYKTIV QVLTQMSLFY QPQHMFCITV DDQSPNEYKS VIQALPSCFP 180
  181 NMHVFIGEPS QWGSFGILKN VYTCFNWLSK SKQKWKYYQY LSGTDLPIRT NLEMVRIFKA 240
  241 LNGSMNTDVS TFEVDRYKNM EGVLPPMPVY KSSMSVVVPR EGADYLISSP RVQKLLKYLS 300
  301 KTWIPDESFW STVLGSPALL PVPGSIRVRD ILWLRKNFKL RPPYENTVNS IGTSYIGRYQ 360
  361 VWGWQKECFG KVKDFSCVFG VEDIEEIMTR PELVAHKLYL EFQPAAFMCM LKEVRRRSLS 420
  421 PDAHLFSARS YSQMPTVELY QGKAITQLTN PNWLVRDSFY NPQHEDFDKE VL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..472] PSI-BLAST 98.522879 No description for 2gakA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.42

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle