YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: rpl-23

General Information:
Name(s) found: rpl-23 / CE00778 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00004435 locus:rpl-23 60S ribosomal protein L23 status:Confirmed UniProt:P48158 protein_id:CCD61530.1 [WormBase]
  • pir||T15337 hypothetical protein B0336.10 - Caenorhabditis elegans [NCBI NR]
  • gi|17554750|ref|NP_498231.1| Ribosomal Protein, Large subunit family member (rpl-23) [Caenorhabditis elegans] [NCBI NR]
  • gi|1350671|sp|P48158.1|RL23_CAEEL RecName: Full=60S ribosomal protein L23 [NCBI NR]
  • gi|13324872|gb|AAK18857.1| Ribosomal protein, large subunit protein 23 [Caenorhabditis elegans] [NCBI NR]
  • 60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00778 WBGene00004435 locus:rpl-23 status:Confirmed SW:P48158 protein_id:AAK18857.1 [wormpep150.fasta]
  • 00778 WBGene00004435 locus:rpl-23 status:Confirmed SW:P48158 protein_id:AAK18857.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ribosomal Protein, Large subunit (15.0 kD) (rpl-23) [Caenorhabditis elegans]gi|13324872|gb|AAK18857.1| Ribosomal protein, large subunit protein 23 [Caenorhabditis elegans]gi|39584899|emb|CAE64323.1| Hypothetical protein CBG09001 [Caenorhabditis briggsae [nrdb_11152004_Chlamydomonas]
  • locus:rpl-23 status:Confirmed SW:P48158 protein_id:AAK18857.1 [wormpep115.fasta.reversed]
  • CE00778 locus:rpl-23 status:Confirmed [wormpep80.hongbin]
  • CE00778 WBGene00004435 locus:rpl-23 status:Confirmed UniProt:RL23_CAEEL protein_id:AAK18857.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00778 WBGene00004435 locus:rpl-23 status:Confirmed UniProt:RL23_CAEEL protein_id:AAK18857.1| [wormORF-contam.fasta]
  • 60S ribosomal protein L23 [nr-271106-contam.fasta]
  • Ribosomal protein, large subunit protein 23 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Ribosomal Protein, Large subunit family member (rpl-23) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE00778 WBGene00004435 locus:rpl-23 status:Confirmed UniProt:P48158 protein_id:AAK18857.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00778 WBGene00004435 locus:rpl-23 status:Confirmed UniProt:P48158 protein_id:CCD61530.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE00778 WBGene00004435 locus:rpl-23 status:Confirmed UniProt:P48158 protein_id:CCD61530.1 60S ribosomal protein L23 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [IEALink to PubMed article]
    ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRGRGGAS GAKFRISLGL PVGAVMNCAD NTGAKNLFVI SVYGIRGRLN RLPSAGVGDM  60
   61 FVCSVKKGKP ELRKKVLQGV VIRQRKQFRR KDGTFIYFED NAGVIVNNKG EMKGSAITGP 120
  121 VAKECADLWP RIAANAGSIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 43.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle