YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: rde-4

General Information:
Name(s) found: rde-4 / CE00630 [WormBase]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • WBGene00004326 locus:rde-4 status:Confirmed UniProt:G5EBF5 protein_id:CAA83012.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: production of siRNA involved in RNA interference [IMPLink to PubMed articleLink to PubMed article]
    RNA interference [IMPLink to PubMed article]
    Molecular Function: protein homodimerization activity [IPILink to PubMed article]
    protein binding [IPILink to PubMed article]
    double-stranded RNA binding [IDALink to PubMed articleLink to PubMed article][IEALink to PubMed article][IMPLink to PubMed article]
    DEAD/H-box RNA helicase binding [IPILink to PubMed article]
    single-stranded RNA binding [IDALink to PubMed article]
    enzyme binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLTKLTFES VFGGSDVPMK PSRSEDNKTP RNRTDLEMFL KKTPLMVLEE AAKAVYQKTP  60
   61 TWGTVELPEG FEMTLILNEI TVKGQATSKK AARQKAAVEY LRKVVEKGKH EIFFIPGTTK 120
  121 EEALSNIDQI SDKAEELKRS TSDAVQDNDN DDSIPTSAEF PPGISPTENW VGKLQEKSQK 180
  181 SKLQAPIYED SKNERTERFL VICTMCNQKT RGIRSKKKDA KNLAAWLMWK ALEDGIESLE 240
  241 SYDMVDVIEN LEEAEHLLEI QDQASKIKDK HSALIDILSD KKRFSDYSMD FNVLSVSTMG 300
  301 IHQVLLEISF RRLVSPDPDD LEMGAEHTQT EEIMKATAEK EKLRKKNMPD SGPLVFAGHG 360
  361 SSAEEAKQCA CKSAIIHFNT YDFTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..270] PSI-BLAST 20.30103 No description for 2yt4A was found.
    2 View Details [271..385] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle