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Protein Overview: eif-3.D

General Information:
Name(s) found: eif-3.D / CE00291 [WormBase]
Description(s) found:
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  • WBGene00001227 locus:eif-3.D Eukaryotic translation initiation factor 3 subunit D status:Confirmed UniProt:P30642 protein_id:CAA78049.1 [WormBase]
  • gi|3878936|emb|CAA78049.1| C. elegans protein R08D7.3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|267549|sp|P30642.1|EIF3D_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit D; Short=eIF3d; AltName: Full=Eukaryotic translation initiation factor 3 subunit 7 [NCBI NR]
  • gi|17554522|ref|NP_498984.1| Eukaryotic Initiation Factor family member (eif-3.D) [Caenorhabditis elegans] [NCBI NR]
  • pir||S24459 hypothetical protein R08D7.3 - Caenorhabditis elegans [NCBI NR]
  • Putative eukaryotic translation initiation factor 3 subunit 7 - Caenorhabditis elegans [Swiss-Prot]
  • Eukaryotic translation initiation factor 3 subunit D OS=Caenorhabditis elegans GN=eif-3.D PE=1 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00291 WBGene00001227 locus:eif-3.D status:Confirmed SW:P30642 protein_id:CAA78049.1 [wormpep150.fasta]
  • 00291 WBGene00001227 locus:eif-3.D status:Confirmed SW:P30642 protein_id:CAA78049.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • eukaryotic Initiation Factor (64.3 kD) (eif-3.D) [Caenorhabditis elegans]gi|3878936|emb|CAA78049.1| Hypothetical protein R08D7.3 [Caenorhabditis elegans]gi|102510|pir||S24459 hypothetical protein R08D7.3 - Caenorhabditis elegansgi|267549|sp|P30642|IF37 [nrdb_11152004_Chlamydomonas]
  • locus:eif-3.D status:Partially_confirmed SW:P30642 protein_id:CAA78049.1 [wormpep115.fasta.reversed]
  • CE00291 status:Partially_confirmed SW:P30642 protein_id:CAA78049.1 [wormpep80.hongbin]
  • CE00291 WBGene00001227 locus:eif-3.D status:Confirmed UniProt:P30642 protein_id:CAA78049.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00291 WBGene00001227 locus:eif-3.D status:Confirmed UniProt:P30642 protein_id:CAA78049.1| [wormORF-contam.fasta]
  • Hypothetical protein R08D7.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Eukaryotic Initiation Factor family member (eif-3.D) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Putative eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3d) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00291 WBGene00001227 locus:eif-3.D status:Confirmed UniProt:P30642 protein_id:CAA78049.1 Eukaryotic translation initiation factor 3 subunit D [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: eukaryotic translation initiation factor 3 complex [ISSLink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    translational initiation [IEALink to PubMed article][ISSLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: translation initiation factor activity [IEALink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPKFELLS LADNTVGWGP LASSSSADEP VPFQQFNKAD RIGRVADWIG VDRFYRRGNE  60
   61 RYNERVYGSA ANAGSQFDYI HGMDEHNFQL VDTSKPMARN PQRNFRVRQM HLRKMMQKEN 120
  121 EKREMVNQST NLRMKRSIAK EQQRAFKMWQ RRGGNARQGQ RGQGGRFGGD RPKERLPSVQ 180
  181 VRPEWVVLEE MNLSAFSKLA LPNIPGGDDI GDHQYGSLQY YDKTIDRVSV KNSIPLQRCA 240
  241 GVFYNVTTTE DPVIQELAQG GAGNVFGTDI ILATLMTAPR SVYSWDIVAY RVGDKLFFDK 300
  301 RNTRDILNPV ETLTVSETSA EPPSFDGNGI NNAKDLATEA FYINQNFRRQ VVKRNDAGFT 360
  361 FKNARAPFED EETGESGTAY KYRKWNLGNG VDGKPVELVC RTELDGVIHG LGNETQTLTI 420
  421 KAFNEWDSTQ SGGVDWRTKL DVQKGAVMAT EIKNNSAKVA KWTLQALLAG SDTMKLGYVS 480
  481 RNNARSTQNH SILLTQYVKP TEFASNIALN MDNCWGILRC VIDSCMKQKP GKYLLMKDPQ 540
  541 SPVIRLYSLP EGTFESERES SDEENSDDDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] MSA 1.029991 View MSA. No confident structure predictions are available.
    2 View Details [105..168] deduced N/A No confident structure predictions are available.
    3 View Details [169..306] MSA 1.032955 View MSA. No confident structure predictions are available.
    4 View Details [307..482] deduced N/A No confident structure predictions are available.
    5 View Details [483..570] MSA 2.030965 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle