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Protein Overview: CE00290

General Information:
Name(s) found: CE00290 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00011143 Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2 status:Confirmed UniProt:P30641 protein_id:CAA78048.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEIPVNEK ETSFRRRVYT TIETLIDIEN TDQLQEHLPH LHCLGWDEVV EERYVNKQCG  60
   61 FPSCQKAPPK ITRNQMFEID RKEGKIFEFR KQRAKFCSEM CYQKSSFVRK QLDEHPLWIT 120
  121 GLTEARTQKV YEVPDESFVS PIAEKSEPVD SQFKKEPSIW LVTDSIIAKV QDMKLSEEAE 180
  181 EPKSLDPEDQ DIEPFKLTDD DKDFIKSIKE FRNSNFGPPS TSKLLKTAPK PVLSAKDRKK 240
  241 EDEVLAKLRA KYGNKNALQK KPPILIEAQE IHSKLKTMEK AKEAWLVDLI KSWFTPETRK 300
  301 LVREGARPTG GAAEQILMDF LSGKKVDAEK LVNLPNLDKY NVKEKRLNIF LHSIRNHWMD 360
  361 LEARLHLTPT RRDILSRVAS TFQLDSENIT GWTKREINSI VIALFIVICL VDVELGDDYF 420
  421 KKDNASPELT AISNELCGLD SFQITGLHAA IKSQC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] Pfam 114.886057 No description for PF04181.4 was found. No confident structure predictions are available.
    2 View Details [216..455] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle