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Protein Overview: sws1

General Information:
Name(s) found: sws1 / SPBC11B10.06 [Sanger Pombe]
Description(s) found:
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  • gi|51316563|sp|O13600.1|SWS1_SCHPO RecName: Full=Zinc finger SWIM domain-containing protein sws1; AltName: Full=SWIM domain-containing and srs2-interacting protein 1 [NCBI NR]
  • gi|2257485|dbj|BAA21382.1| pi005 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112418|ref|NP_595626.1| SWIM domain containing-Srs2 interacting protein 1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|13872539|emb|CAC37510.1| SWIM domain containing-Srs2 interacting protein 1 [Schizosaccharomyces pombe] [NCBI NR]
  • SWIM domain containing-Srs2 interacting protein 1 [Sanger Pombe]
  • (O13600) Hypothetical zinc finger SWIM domain-containing protein SPBC11B10.06 [Swiss-Prot]
  • Zinc finger SWIM domain-containing protein sws1 OS=Schizosaccharomyces pombe GN=sws1 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: O13600; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: CAC37510;O13600; [pompepV13]
  • Pi005 protein (Hypothetical protein) [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • Hypothetical zinc finger SWIM domain containing protein SPBC11B10.06 [4896.FASTAC]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein; sequence orphan [Schizosaccharomyces pombe]gi|13872539|emb|CAC37510.1| pi005 [Schizosaccharomyces pombe]gi|2257485|dbj|BAA21382.1| pi005 [Schizosaccharomyces pombe]gi|51316563|sp|O13600|YNI6_SCHPO Hypothetical zinc finger SWIM dom [nrdb_11152004_Chlamydomonas]
  • (O13600) Pi005 protein (Hypothetical protein) [pompep4896_normal_reversed]
  • |sws1||SWIM domain containing-Srs2 interacting protein 1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • pi005 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC11B10.06 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Hypothetical zinc finger SWIM domain-containing protein SPBC11B10.06 [nr-271106-contam.fasta]
  • SPACTOKYO_453.32 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Zinc finger SWIM domain-containing protein sws1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sws1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 209 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleoplasm [IDALink to PubMed article]
    Biological Process: recombinational repair [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQGHFTSNS YHSKTLNSSS LPVSSKFSHT NDPDVEGVDN DSFSKALCNK DLDPSSTIRS  60
   61 VISSLLDSLQ DKALQQSPNT SLSKLLLEDQ DFGSLWLSLS FIFCNYWQPA MLILDSKSIH 120
  121 PLPLTDGEVL HRWECEVDSN NKTTIDLKYW YCSCSQFSYN AFNSSRSFDE PMPKNEQETW 180
  181 GGRCLSHHPT ICSHILAASI LRACHNLVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle