Protein Overview: SPBC146.08c

General Information:
Name(s) found:	SPBC146.08c [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	pir\|\|T39422 hypothetical protein SPBC146.08c - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|74698599\|sp\|Q9Y803.1\|YN98_SCHPO RecName: Full=S1-like domain-containing protein C146.08c [NCBI NR] gi\|5441490\|emb\|CAB46761.1\| translation initiation factor eIF1A-like [Schizosaccharomyces pombe] [NCBI NR] gi\|19112189\|ref\|NP_595397.1\| translation initiation factor eIF1A (predicted) [Schizosaccharomyces pombe] [NCBI NR] translation initiation factor eIF1A-like [Sanger Pombe] S1-like domain-containing protein C146.08c OS=Schizosaccharomyces pombe GN=SPBC146.08c PE=1 SV=1 [Swiss-Prot] PUTATIVE ELONGATION INITATION FACTOR EIF1A: Q9Y803; [pompepVF.fasta] Hypothetical protein [pompep4896] \|\|\|putative eukaryotic translation initation factor eIF1a [pompepnew.fasta] SPBC146.08c protein [4896.FASTAC] \|\|\|translation initiation factor\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [pombe041504.fasta] hypothetical protein [Schizosaccharomyces pombe]gi\|5441490\|emb\|CAB46761.1\| SPBC146.08c [Schizosaccharomyces pombe]gi\|7491355\|pir\|\|T39422 hypothetical protein SPBC146.08c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas] (Q9Y803) Hypothetical protein [pompep4896_normal_reversed] \|\|\|translation initiation factor eIF1A-like\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] SPBC146.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta] eukaryotic translation initation factor eIF1a [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta] \|\|\|translation initiation factor eIF1A-like \|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [Other_S_Pombe_12-15-2011_reversed.fasta] S1-like domain-containing protein C146.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC146.08c PE=1 SV=1 [uniprot_sprot.fasta.20160308]
Organism:	Schizosaccharomyces pombe
Length:	127 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cytosol [IDA]
Biological Process:	positive regulation of translational initiation [IC] translational initiation [IEA]
Molecular Function:	translation initiation factor activity [IEA] RNA binding [IEA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MSKKYGGQIS FDPPARLEKD QVVAKVVQLK GSALFMVVEN NGQELLVEMP PKYRNKIWVR 60 61 RNGFVIVDKS EFLEKDNKID GTILYVVQSP LKNWKKQIYW PKEFADESLN QNDSEESSSS 120 121 EEEYDSD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..127]	PSI-BLAST	37.39794	Translation initiation factor-1a, eIF1a

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
binding	1.48105739930471	bayes_pls_golite062009
nucleic acid binding	1.28689546979233	bayes_pls_golite062009
DNA binding	0.60226991426331	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle