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Protein Overview: mrps8

General Information:
Name(s) found: mrps8 / SPCC736.10c [Sanger Pombe]
Description(s) found:
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  • pir||T41567 hypothetical protein SPCC736.10c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74676130|sp|O74956.1|RT08_SCHPO RecName: Full=37S ribosomal protein subunit S8, mitochondrial; Flags: Precursor [NCBI NR]
  • gi|3169080|emb|CAA19274.1| mitochondrial ribosomal protein subunit S8 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075281|ref|NP_587781.1| mitochondrial ribosomal protein subunit S8 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • mitochondrial ribosomal protein subunit S8 [Sanger Pombe]
  • 37S ribosomal protein subunit S8, mitochondrial OS=Schizosaccharomyces pombe GN=mrps8 PE=2 SV=1 [Swiss-Prot]
  • WEAK SIMILARITY TO E. COLI RIBOSOMAL PROTEIN S8: O74956; [pompepVF.fasta]
  • PROTEIN WITH WEAK SIMILARITY TO E. COLI RIBOSOMAL PROTEIN S8: O74956; [pompepV13]
  • Hypothetical protein [pompep4896]
  • |||putative mitochondrial ribosomal protein S8 [pompepnew.fasta]
  • SPCC736.10c protein [4896.FASTAC]
  • |||mitochondrial ribosomal protein S8 (predicted)|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|3169080|emb|CAA19274.1| SPCC736.10c [Schizosaccharomyces pombe]gi|7491975|pir||T41567 hypothetical protein SPCC736.10c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |mrps8||mitochondrial ribosomal protein S8|Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (O74956) Hypothetical protein [pompep4896_normal_reversed]
  • |mrps8||mitochondrial ribosomal protein subunit S8|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC736.10c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC736.10c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |mrps8||mitochondrial ribosomal protein subunit S8 |Schizosaccharomyces pombe|chr 3|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • 37S ribosomal protein subunit S8, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrps8 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 152 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial small ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLHYVFSHL QNSFRARKSL ASVPNCNSVL ELCAVLYHQG FLSSIQRGDI HGPDALPTIT  60
   61 TRQNVATRRL WLGLKYFEGK PVLHYIRAVS KPSRKVNLTP SELLQFAKGR KVSFVNGLEP 120
  121 AEVGIVETKH GIMSIDDAIK NNLGGNVICR VK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] PSI-BLAST 42.0 No description for 1vs5H was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.91574154879999 bayes_pls_golite062009
  • structural molecule activity
    		•  9.33953790706737 bayes_pls_golite062009
  • RNA binding
    		•  1.37413951383134 bayes_pls_golite062009
  • binding
    		•  1.233710741259 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.748509060999477 bayes_pls_golite062009
  • protein binding
    		•  0.569993864025864 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle