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Protein Overview: SPAPB1A10.14

General Information:
Name(s) found: SPAPB1A10.14 [Sanger Pombe]
Description(s) found:
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  • gi|50401790|sp|Q9HDX6|YK1E_SCHPO Uncharacterized protein PB1A10.14 [NCBI NR]
  • gi|19114440|ref|NP_593528.1| F-box protein, unnamed [Schizosaccharomyces pombe] [NCBI NR]
  • gi|12188978|emb|CAC21487.1| F-box protein [Schizosaccharomyces pombe] [NCBI NR]
  • F-box protein, unnamed [Sanger Pombe]
  • Uncharacterized protein PB1A10.14 OS=Schizosaccharomyces pombe GN=SPAPB1A10.14 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: Q9HDX6; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||F-box protein [pompepnew.fasta]
  • Hypothetical protein PB1A10.14 in chromosome I [4896.FASTAC]
  • |||F-box protein (context dependent)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|12188978|emb|CAC21487.1| SPAPB1A10.14 [Schizosaccharomyces pombe]gi|50401790|sp|Q9HDX6|YK1E_SCHPO Hypothetical protein PB1A10.14 in chromosome I [nrdb_11152004_Chlamydomonas]
  • |||F-box protein |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9HDX6) Hypothetical protein [pompep4896_normal_reversed]
  • |||F-box protein|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAPB1A10.14 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAPB1A10.14 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |pof15||F-box protein |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 243 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [NAS]
    Biological Process: protein modification by small protein conjugation [NAS]
    Molecular Function: protein binding, bridging [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCVTRAPMS VPQTALQPNS YVNFDAQQTS STLLPVEVID SVMQYLPAHD VIQSSFASYP  60
   61 LTLIANKIIR ARLSFLDEYS LRVFAKDVYT DSPICNLSAR RGLYSLQYDG YSVFHLDPNN 120
  121 CSSIFQISFE DDEDLASFER YPGEFLAPHI NVRIHVTLSR SSCDRHQADI FSCFQDPIRV 180
  181 RRDWLDSIKP GQPETLWFDQ NTQHVIGLIV TRVDAAPGKY DLSVTSVIVQ TEYLLSCLEK 240
  241 RVH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle