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Protein Overview: git1

General Information:
Name(s) found: git1 / SPBC21C3.20c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • C2 domain protein Git1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1098 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: conjugation with cellular fusion [NAS]
    cAMP-mediated signaling [NASLink to PubMed article]
    meiosis [IMPLink to PubMed article]
    Molecular Function: signal transducer activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFTSVEPPD FFDWTARAIF LLSTLRSRRN AKQIERENAL LDQIKELLSI AIIQCHERNI  60
   61 PSIDLPPSFF NYVCEQLPRH PFAKIASSYI DTHTLFFQIS ISSFLCRFSN CSEDEIRLFK 120
  121 QHQSLDSFLL SLFDLLCSHH FSVEFTSISL IIKSSQWLFY TLSDYAHESL TGVEADITTK 180
  181 FLSTLADTWP EFEEQCTLSK HLFLLGDFSL ISYVKVLCGV FNIPNYNAFI LSVEDLLPEN 240
  241 ISFAAVADFQ LSKYRAINDN SVLRSDDFSS KAVFDKYVER ECYYSENAIS KIFQNYPDLA 300
  301 VLFEELQYAE GNNDLLSAIL NTNKYTLRPD DCAPYFYRLM DLCLRYCYSQ SNEIGTNVLW 360
  361 SMTTSFINIW RIHPGTCCCV VLSIYWPYLE DKLLKFSDLG DIFEYFFSLI HDCDYAIWSV 420
  421 HDEHQFSELL AFYHRRALND LVEELGSCPR SSDSCRAILD ILNNYIFSCP LFLVTPEELE 480
  481 EQYTDFFKKL KEKYGEFFQN LLKKELTGKP ESDLEGLRLV GVQLQATYEN LKSNFSARIF 540
  541 NQLSVHSFFA EATCHLFLEK LPTITKTYVY SNCKEIPDHI LEMINALYQQ TRALVACTGY 600
  601 LSSDYPKIYE AFSGTFVYRN LSLIIDKGLA NVLQTVLRES FIPKRSRFYS DSTKMILAPL 660
  661 QDCYDFLQKI DWPSSKDANR FYLHLGKLSE NYIHYYVDSM YALFIYSTDI PLKAEPLVPD 720
  721 LPVKQLKEKA SHFKRHSGDP NFLKLYRESF TLINTVSLVS GWLKMLHQRI DYKILTEKVM 780
  781 HFKDMEVPSA TVIISIKMAH LLVTPKAPYS FSVLLQDPES EFCVHTRDVY DELVPNWKET 840
  841 YQMEITNVKR FKLIIYQRNI HTGLETVYGH ATLEVDPDKL KQGHGKDVWL DITNKGQILI 900
  901 GLRVLLKRET PNYYCFAQME YLTVTEVKML NVLMISLSKF IRNSLRNSGL MDFVRYLDGD 960
  961 ENDNAEAETK EKMDELQARC EKEQQSLLAE LDDFFYWIYV NLLPKPLFYL LSRLWFGLLE1020
 1021 TFRDILVPPV TDSTLRRIPL NKRELKMVYS WLQLFYDFFR NFQDIAPFDF LNTDEYKSVM1080
 1081 AIKDYYFVKS KDVKRVSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..235] MSA 1.048977 View MSA. No confident structure predictions are available.
    2 View Details [236..413] deduced N/A No confident structure predictions are available.
    3 View Details [414..544] deduced N/A No confident structure predictions are available.
    4 View Details [545..707] PSI-BLAST 9.69897 No description for 2yrbA was found.
    5 View Details [708..788] PSI-BLAST 17.0 Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
    6 View Details [789..996] PSI-BLAST 34.69897 Synaptogamin I
    7 View Details [997..1098] MSA 2.063976 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle