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Protein Overview: SPBC1685.14c

General Information:
Name(s) found: SPBC1685.14c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • Vid27 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 801 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMLKSLGKY IWGNTNSTEI VQIPYGQLYS VHENYRECMF KDASASIRRT TAEFQYQLVI  60
   61 QRAYEEGEEE LEDDGDEAED EQSFLLDEKL HLRFDVNKDS ITIMWDNPDF QDGTLYEFTC 120
  121 ENCLQEGVAY TFEMVALQCM YERKYRQSHE KATLADLEQF SNPITRPSKE VDSLENIVTK 180
  181 LDLESEDLMR LKKQEQLDDE IAKKYLLGQQ EAEEPLVQQQ TSIVNPEKEE VTKTENIKSL 240
  241 EGELMGTISA ELHLFDAVEE VFILQDPNVE ASVFDLGDWN YWFTISTEEK TWLSQSVDAD 300
  301 MNPVFSFEHL SFIWNYFDAN SNAFSWLLRF DSQVRMEQFQ ELLMRALWES LNQQRWLKID 360
  361 DEQRDYVMET FHEDEELEDS EDEEFARQQL LSRKEEEEEE DEEASDFEDS FADFSDGEAD 420
  421 DLDESRWRKE AAKEHNSLLA VGYKNDRSYV VRNNKIGVFK HVDEKGLKFQ TALNNLSTPK 480
  481 GKSLRPSKLM LHNQDSSILF QTENAPHSLY HMDIEYGKIV DEWKVHDDVP LVTFTPDNKF 540
  541 AQMTAEQTLI GLSNNSIFRI DPRVEGNKLV AEQFKQYATK NDFSSAATTE NGYIAVASNK 600
  601 GDIRLFDRIG VNAKTALPAL GEAIIGVDVT ASGDFVLATC KTYILLIDTR IKEGRYAGRL 660
  661 GFERNFAKDK KPKPKRLQLS PQHIAMMQRE LKGGASFTPA KFNTGIDAKE TTIVSSIGPF 720
  721 LISWNLDRVK RGFTDSYKIR RYDANVQAED FRFGTDRSLI VALPDDVAMV DKSSLRRPTR 780
  781 ESICTPVKKL RSKHDIVNAP Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] MSA 1.013978 View MSA. No confident structure predictions are available.
    2 View Details [233..801] FFAS03 3.89 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.82996882191214 bayes_pls_golite062009
  • protein binding
    		•  0.892674910136367 bayes_pls_golite062009
  • transporter activity
    		•  0.508560035300103 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle