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Protein Overview: jmj1

General Information:
Name(s) found: jmj1 / SPAC25H1.02 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • Jmj1 protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromatin [ISSLink to PubMed article]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    regulation of transcription [ISSLink to PubMed article]
    histone demethylation [ISSLink to PubMed article]
    Molecular Function: histone demethylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYRPTAHEF DDLPKIEFID SCPYQVFLEQ YLKPCVPVLI GPKLTAQWKA NTTWITSKGD  60
   61 PNILHSYILP DKPCTSRDNT SGNSLLNDND IKNFIRSYAE RIVNNEDKNV FLDSLLLSPN 120
  121 YEYLEENYGT IPVPLAYCNE KDRYGSQRRE TVPLKSALHE LRDEQVQLQC RQAPSNQALK 180
  181 SLYAKDMHLF RHLDPADFPY STPDIFADDW LNAYVIDCES DDFRFAYLGS HLTTTGLHTD 240
  241 VYASHSFSVN LCGVKCWLFI DPKDLQTIAS LYDDQQLPSW ITKDDLFRGP LVNHRHLIKI 300
  301 LFQYPGQTVF VPSGWYHQVL NIGTTLSINH NWCNASCILQ MYTALKEQYE VSAESLKDLL 360
  361 EDGIVTKDRF SQVVTEVVEA NYGWCWRRFW GMIKHQLKRR DAILHSSEYF SKWPIQPEFL 420
  421 PPLSWEYSIL KNILLNDEPG STFDSGSPPS SIVTIFKSLG DFKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 41.522879 No description for 2yu1A was found.
    2 View Details [369..464] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle