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Protein Overview: SPAC27E2.01

General Information:
Name(s) found: SPAC27E2.01 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • alpha-amylase homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    cell surface [ICLink to PubMed article]
    Biological Process: cellular polysaccharide catabolic process [ICLink to PubMed article]
    extracellular polysaccharide metabolic process [IC]
    Molecular Function: alpha-amylase activity [ISSLink to PubMed article]
    calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLDKQIPII YDFGENYEKN KDIWRRQCIY QILTDRFALD DHCTTAPSTG RMYLGGTWRG  60
   61 IIQKLDYIQS LGCTAVWISP IVKNIEGVTG YGEAYHGYWA EDLTQLNPHF GTKQDLTELV 120
  121 DQLHKRNMLC MIDIVVNHMA HAGDSPIDYS KYAPFNSPSH YHPKRFLHNY DDTWDCEIAW 180
  181 LGDEVVSLMD IRTEDQEVHN FFQNWIRDLI QTYHFDGLRI DTAKHVQKEF YPPFIAAANV 240
  241 FAFGEVYHGD PKFIAKYLEY IPSAANYPLY YQIENTFFPP KQSMNIFYQK AILEARATSM 300
  301 DTTILGNFTE NHDVPRFLNR STDYSLLCNT LTLLLFTDGI PIIFQGQEQM YAGGHDPENR 360
  361 DALWTSNYNQ QNPIFQFLKK LIKLRQFLVD NVSGFTTELS NMLFVNEHVY VFRRPGVIIV 420
  421 VSNAGSNSDV DTSAEFSITE RESLEFIDVL SGSQFSSLPT EDSSTISMNL EFSFPRVLVH 480
  481 RGLFHSMNEL A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..491] PSI-BLAST 79.69897 No description for 2guyA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  4.55801959095491 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  4.29108420555514 bayes_pls_golite062009
  • hydrolase activity
    		•  2.98140830993539 bayes_pls_golite062009
  • alpha-amylase activity
    		•  2.09193270404736 bayes_pls_golite062009
  • amylase activity
    		•  2.03484942782894 bayes_pls_golite062009
  • chitinase activity
    		•  1.947859226275 bayes_pls_golite062009
  • glucosidase activity
    		•  1.92306554001182 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • binding
    		•  0.63693798355947 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  0.502835520523619 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.28185708488534 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle