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Protein Overview: rpc53

General Information:
Name(s) found: rpc53 / SPCC18.07 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • DNA-directed RNA polymerase III complex subunit Rpc53 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    DNA-directed RNA polymerase III complex [ISSLink to PubMed article]
    Biological Process: transcription from RNA polymerase III promoter [ISSLink to PubMed article]
    Molecular Function: DNA binding [IEA]
    DNA-directed RNA polymerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKFTPKFVP RRKNGPVEEK DVDERVKIEF DVESQKKWKA SRPKPEIKLT ASGPFALGPN  60
   61 ASSSGTGRPI GSVYVPPPNV KNEEKDDALS KLAASSGHDE GHDEDMVDIL KLRELNGQEQ 120
  121 GKTDIGGKDL LVPIITDRML PESNDEKLKH HAESAIHTTV INKEDEEQER VALDLQSLAQ 180
  181 HLGLTEQEGM EDHFKDQMVL MQFPDKLPRF MGDADVDPVW PSSEVKEEEA GEKTDVEEKK 240
  241 DPDKHGRENG NIDDLTSLPY PAFHPPAGQI GVLRVHQSGK TTLEMGGVNF VVQSGSDCLF 300
  301 LQEIAVVDYD SKRIWNLGSF ERRMIVSPDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] MSA 2.124994 View MSA. No confident structure predictions are available.
    2 View Details [153..330] Pfam 77.060481 No description for PF05132.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle