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Protein Overview: spt4

General Information:
Name(s) found: spt4 / SPBC21C3.16c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • transcription elongation factor complex subunit Spt4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 105 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    DSIF complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    chromosome, centromeric region [IEA]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    negative regulation of RNA elongation from RNA polymerase II promoter [IGILink to PubMed article]
    positive regulation of transcription [IEA]
    mRNA processing [IPILink to PubMed article]
    Molecular Function: RNA polymerase II transcription elongation factor activity [IGILink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]
    protein binding [IPILink to PubMed article]
    positive transcription elongation factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLNRTRSR ACLICGIVLP HSVFANKGCP NDGVDDVETF TSPVFEGIMA MMSPTESWVA  60
   61 RWQRIDTFTP GIYATRVQGV LNEDVVESLR RRGINYRPRN GTSWD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] PSI-BLAST 36.69897 No description for 2exuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle