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Protein Overview: SPBC29A3.09c

General Information:
Name(s) found: SPBC29A3.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • AAA family ATPase Gcn20 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 736 amino acids

    Gene Ontology:
    Cellular Component: cytosolic ribosome [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of translational elongation [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]
    ATP binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQVIQNNCS EVDPHVLSYC TGYANDAIKD VDEASDHTIS LIRNLLLDAG AREEAVQLIQ  60
   61 NELEKQFKER EEHLDTLQTN GLVRLKETIR MDSQSEISST MGLVGEKMEL DAVKGRKVES 120
  121 RVDRRKLEKA ERKIRAKWEK RTIKAEYESS KLVQPEQKSY EEFYMAVNPL DLSGSNQGKS 180
  181 KDIKIDGIDL AFAGHRILTG ASLTLAQGRR YGLTGRNGIG KSTLLRALSR REIAIPTHIT 240
  241 ILHVEQEMTG DDTPALQSVL DADVWRKYLI QDQEKITNRL STIEKELEEL SKDQTADQAI 300
  301 SRRLERERDE LDLRLLDIQN KLSEMDSDRA ESRAATILAG LGFTQEMQSH ATKTFSGGWR 360
  361 MRLSLARALF CQPDLLLLDE PSNMLDVPSI AFLSEYLQTY KNIVLVVSHD RSFLNEVATD 420
  421 IIHQHSERLD YYKGNFSQFY ATREERCKNQ LREYEKQMEY RKHLQSFIDK FRYNAAKSSE 480
  481 AQSRIKKLEK LPILEKPQTE EEVEFEFPPV EKISPPILQM SDVNFEYVPG HPILKHVDID 540
  541 VQMDSRIGVV GPNGAGKSTM LKLLIEQLHP TSGIVSRHPR LRIAYFAQHH VDTLDLNLNA 600
  601 LSFLAKTFPG KGEEEYRRHL GAFGVSGPLA LQKMITLSGG QKSRVAFACL GLQNPHILIL 660
  661 DEPTNHLDME SMDALTRAVK RFQGGVILVS HDVDFLDKTC TSIWQCDHNV VSKFDGTISQ 720
  721 YKKFCLSQQP TMTIKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..607] PSI-BLAST 45.522879 No description for 2iw3A was found.
    2 View Details [608..736] PSI-BLAST 57.39794 RNase-L Inhibitor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle