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Protein Overview: SPBC2F12.10

General Information:
Name(s) found: SPBC2F12.10 [Sanger Pombe]
Description(s) found:
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  • pir||T40131 hypothetical protein SPBC2F12.10 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582015|sp|O14341.1|RM35_SCHPO RecName: Full=60S ribosomal protein L35, mitochondrial; Flags: Precursor [NCBI NR]
  • gi|2239239|emb|CAB10157.1| mitochondrial ribosomal protein subunit L35 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112498|ref|NP_595706.1| mitochondrial ribosomal protein subunit L35 [Schizosaccharomyces pombe] [NCBI NR]
  • mitochondrial ribosomal protein subunit L35 [Sanger Pombe]
  • 60S ribosomal protein L35, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC2F12.10 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE MITOCHONDRIAL RIBOSOMAL PROTEIN OF THE LARGE SUBUNIT; SIMILAR TO S. CEREVISIAE MRPL35: O14341; [pompepVF.fasta]
  • PUTATIVE MITOCHONDRIAL RIBOSOMAL PROTEIN OF THE LARGE SUBUNIT; BY SIMILARITY TO YEAST MRPL35: O14341; [pompepV13]
  • Hypothetical protein [pompep4896]
  • |||putative mitochondrial ribosomal protein of the large subunit [pompepnew.fasta]
  • SPBC2F12.10 protein [4896.FASTAC]
  • |||mitochondrial ribosomal protein (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|2239239|emb|CAB10157.1| SPBC2F12.10 [Schizosaccharomyces pombe]gi|7491572|pir||T40131 hypothetical protein SPBC2F12.10 - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||mitochondrial ribosomal protein subunit L35|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O14341) Hypothetical protein [pompep4896_normal_reversed]
  • SPBC2F12.10 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC2F12.10 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 370 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDLFQLTCL TSTVSISNFI LYNRKYRKSC ALAFLTLRYT LLCYSIPIHI HTVNYLAFTI  60
   61 ARMKRVWPRI PTISNVCRAR SIYSAAQENA YRSSVKLIQE YSEKVHKKLQ AKLLENPSET 120
  121 SPEIERLQVL SQINLPEVRS KFHKKEIDYT NPVFLYMLKQ QWEDYQKLLL LQRLEQMKVI 180
  181 KDSGIGSFSP SVDVQLGFNP ENNDSITPGT ILPSTVTVKT PWLSVLPFNC KKNHYSVITL 240
  241 DLDVPNYETN RFETHCNWLL TNIPIEASKR VPIDTSKAFF QYRPPIVHRG EDKHRILTLV 300
  301 LRQKSSSISI PSNALVRERF DLSEFCSIYD LEPVGAHLWR SGWDSDAVAL LSKHPSVHEY 360
  361 RDIRVERIPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] MSA 1.032991 View MSA. No confident structure predictions are available.
    2 View Details [166..370] PSI-BLAST 47.522879 terminal flower 1 (tfl1) from arabidopsis thaliana


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle