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Protein Overview: rpc82

General Information:
Name(s) found: rpc82 / SPAPB1E7.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • DNA-directed RNA polymerase III complex subunit Rpc82 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    DNA-directed RNA polymerase III complex [ISSLink to PubMed article]
    Biological Process: transcription from RNA polymerase III promoter [ISSLink to PubMed article]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]
    DNA-directed RNA polymerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQYAVELCE ILVEEFFGDC CSAVASALLR HGRLTIPMLQ KRTSLPGPKI RQALVSLMQH  60
   61 HMVLYVTVIE NVREVTYYET QWKEIYNILR KGKDVYLISQ KLNQEAASVV KYLSTQGRAR 120
  121 VLEVFNAFDK KVDGSDEESR MMQKNLTELI YQKFLLVVQP RHLIPVGDQE MQLRIKHLDR 180
  181 RKSENVSEIK KNREVDDSVA LEMLELRAAD MSELQGLTRK PKESIPHPTK RRKRAVGSAP 240
  241 SVSTDLNNIL DDDNSILVPD LSAHVRINSG KLSVLSKNAR LTHWVERRIG KSTSLVYSHV 300
  301 LSMLEPRLFS ISNQSPVFTL TTMELTRNFP NDIDVESSIV DKQYSVNSAS NELRVMEKLN 360
  361 ELDELAEEDN YEESVDENAN RKSKVLAQHL ELLADCSLKF ISKIGNRGMG EWAVNFTHLT 420
  421 DMLRAIEYEN FIEQKFGERA IRLLRIIKDK GKIEEKQLAN IALLRQRDLR TVLQAMAEIG 480
  481 ALELQEVPRS SDRAPSKTFF LWFHRPDRAY SLLLDELYHV IARLYMRLRD ARAQRAQLIE 540
  541 KAERIDIKGN EEQYLQKFEQ AELKKLYSYE EKLLLQASRL DDMVLVFRDN L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] FFAS03 1.16 X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus
    2 View Details [131..408] deduced N/A No confident structure predictions are available.
    3 View Details [409..591] FFAS03 1.63 An extended winged helix domain in general transcription factor E/IIE alpha


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle