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Protein Overview: sly1

General Information:
Name(s) found: sly1 / SPCC74.01 [Sanger Pombe]
Description(s) found:
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  • pir||T41585 stxbp-unc-18-sec1 family protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582476|sp|O74534.1|SLY1_SCHPO RecName: Full=Protein sly1 [NCBI NR]
  • gi|3581893|emb|CAA20831.1| SNARE binding protein Sly1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075874|ref|NP_588374.1| SNARE binding protein Sly1 [Schizosaccharomyces pombe] [NCBI NR]
  • SNARE binding protein Sly1 [Sanger Pombe]
  • Protein sly1 OS=Schizosaccharomyces pombe GN=sly1 PE=2 SV=1 [Swiss-Prot]
  • STXBP-UNC-18-SEC1 FAMILY VESICLE TRAFFICKING PROTEIN: O74534; [pompepVF.fasta]
  • Stxbp-unc-18-sec1 family protien transport protein [pompep4896]
  • |sly1||stxbp-unc-18-sec1 family [pompepnew.fasta]
  • Sly1 protein (Spcc74.01 protein) [4896.FASTAC]
  • |sly1||sec1 family|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • stxbp-unc-18-sec1 family protien transport protein [Schizosaccharomyces pombe]gi|3581893|emb|CAA20831.1| SPCC74.01 [Schizosaccharomyces pombe]gi|7493437|pir||T41585 stxbp-unc-18-sec1 family protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O74534) Stxbp-unc-18-sec1 family protien transport protein [pompep4896_normal_reversed]
  • |sly1||SNARE binding protein Sly1 |Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPCC74.01 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPCC74.01 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Protein sly1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sly1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 639 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: vesicle docking during exocytosis [ISSLink to PubMed article]
    intracellular protein transport [IC]
    Molecular Function: SNARE binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIASVKTPS SLREAQIQSL EKLLNLNQDV NELESSPQHA SNFPIWKVLI FDKAGSETIS  60
   61 SVLRISDLRK HGVTVHMNIT SFRQPIADVP AIYFVQPTQE NIELIIEDLS KGLYESAYVC 120
  121 FSSTISRALL EQFAELASKT NTSHMIHQVY DQYLNYVVLE SDFFSLQLPK IFHTFHNPSS 180
  181 DEALINSRVQ DIVNGLFSVI VTLGTIPIIR CPQGSAAEMV AQKLNQRLKD HLMNTKDAFV 240
  241 SVNPKPRPIL ILLDRTVDLI PMINHSWTYQ ALIHDTLNMQ LNRITVESVD DGKMTKRFYD 300
  301 LDGNDFFWES NASKPFPKVA ENIDEELTRY KNDASEITRK SGVSSLEEVN VDAFADSTYL 360
  361 KSAVSLLPEL TARKQILDMH MNIATALLKA IQERHLDDFF QLEDNITGLN RSAILACINN 420
  421 KEQGTPEDKL RFFIIWYLSV DSVPASDLQA YEEALVNNGC TLEALNFVKR VREITKMTML 480
  481 ASSTTRPATG QTGDNLFRGF SSLSTRFTDR FKEAGIGGLE NIISGVRNLI PFRKDGTITS 540
  541 IVQSLMDPGS SPASKQTESY LLLDPKSARA ITVNNDPRAM NKRQTFSEAI VCVLGGGNYL 600
  601 EYGNLADWAR EQNPKKRIIY GSTDILSPSE FMEEMASLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..639] PSI-BLAST 142.0 Sly1P protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNARE binding
    		•  4.56428593085019 bayes_pls_golite062009
  • syntaxin binding
    		•  3.46044132736061 bayes_pls_golite062009
  • binding
    		•  2.5852206934785 bayes_pls_golite062009
  • protein binding
    		•  1.62257469066708 bayes_pls_golite062009
  • syntaxin-1 binding
    		•  0.269372794919901 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle