Protein Overview: SPCC1183.07

General Information:
Name(s) found:	SPCC1183.07 [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	pir\|\|T40847 probable rRNA biogenesis protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|74582568\|sp\|O74835.1\|RRP5_SCHPO RecName: Full=rRNA biogenesis protein rrp5; AltName: Full=Ribosomal RNA-processing protein 5; AltName: Full=U3 small nucleolar RNA-associated protein rrp5; Short=U3 snoRNA-associated protein rrp5 [NCBI NR] gi\|3650378\|emb\|CAA21087.1\| U3 snoRNP-associated protein Rrp5 [Schizosaccharomyces pombe] [NCBI NR] gi\|19075390\|ref\|NP_587890.1\| U3 snoRNP-associated protein Rrp5 [Schizosaccharomyces pombe 972h-] [NCBI NR] U3 snoRNP-associated protein Rrp5 [Sanger Pombe] rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe GN=rrp5 PE=1 SV=1 [Swiss-Prot] PUTATIVE RRNA BIOGENESIS PROTEIN; RRP5 HOMOLOG; MULTIPLE S1 RNA BINDING DOMAIN PROTEIN: O74835; [pompepVF.fasta] PUTATIVE RRNA BIOGENESIS PROTEIN; RRP5 HOMOLOG; MULTIPLE S1 RNA BINDING DOMAIN PROTEIN: ;N0ACC; [pompepV13] Putative rRNA biogenesis protein, rrp5 homolog, multiple S1 rna binding domain protein [pompep4896] \|\|\|putative rRNA biogenesis protein [pompepnew.fasta] SPCC1183.07 protein [4896.FASTAC] \|\|\|RNA-binding protein\|Schizosaccharomyces pombe\|chr 3\|\|\|Manual [pombe041504.fasta] putative rRNA biogenesis protein; rrp5 homolog; multiple S1 rna binding domain protein [Schizosaccharomyces pombe]gi\|3650378\|emb\|CAA21087.1\| SPCC1183.07 [Schizosaccharomyces pombe]gi\|7492941\|pir\|\|T40847 probable rRNA biogenesis protein - fission yeast [nrdb_11152004_Chlamydomonas] (O74835) Putative rRNA biogenesis protein, rrp5 homolog, multiple S1 rna binding domain protein [pompep4896_normal_reversed] rRNA biogenesis protein rrp5 (Ribosomal RNA-processing protein 5) (U3 small nucleolar RNA-associated protein rrp5) (U3 snoRNA-associated protein rrp5) [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta] U3 snoRNP-associated protein Rrp5 [Schizosaccharomyces pombe] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta] \|\|\|U3 snoRNP-associated protein Rrp5\|Schizosaccharomyces pombe\|chr 3\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] SPCC1183.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta] hypothetical protein SPCC1183.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta] \|\|\|U3 snoRNP-associated protein Rrp5 \|Schizosaccharomyces pombe\|chr 3\|\|\|Manual [Other_S_Pombe_12-15-2011_reversed.fasta] rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp5 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
Organism:	Schizosaccharomyces pombe
Length:	1690 amino acids
Gene Ontology:
Cellular Component:	nucleolus [IDA] small nucleolar ribonucleoprotein complex [ISS]
Biological Process:	rRNA processing [ISS]
Molecular Function:	snoRNA binding [ISS] rRNA primary transcript binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNKRKRSN ASEGSDSQGN ERISSLSANE ATQDFPRGGA SSLTPLEYKE AVLEAKKDFM  60
   61 ESASGTAELS KKTRPKKKGS KKSSKSELDN EENLKVHIQS LRYKNITPGS LILGQIAQIN 120
  121 TLDLAVSLPN CLTGYVPITN ISDKLSDRLD SIDNHAEDNA ATEEEDGLNQ IPDLMDLYKV 180
  181 GQWVRVSVTA LGSENTTKTG KRHIELSLKP QDANGSAPEA ADFVAGSMIQ AVVSSIEDHG 240
  241 IVFDIGINNY TGFLSKKHIN DFPFVEGQSL LCSVISKEDR IFHLSLTATS TKALEVMPSV 300
  301 QAILPGDYIN VLVTDIKESG VIAKYMGVVD VTSDIYHSSP VKGEDLEDKF QLAKSVPARV 360
  361 LFVIPGDPPK IAVSFLPHVL TFNFATPNTP HPDQLDIGFI VNAAKVTYVS SSLGVFCDVG 420
  421 VPEISGFAHI SRLSDKKVAG ISPNSGPYKV DSTHEARIIN YSYVDNLYIL SFQQSVLNQQ 480
  481 FLRIEDIEVG QFVDGTIAKL IPQGIVVTIS EGINGLVPST HMADIALQFP ERRFKVGSSV 540
  541 KCRVLSTNVL RKRVLLTLKK SLLNTDLPLI YDYEQATPGT QTVGTLARIF EDGAIVEFYN 600
  601 SVRAFLPVSE MSEAYIRDAR EHFKVGQTLS VTIVSCDPEN RKMRVGCREQ SWDAKRLERF 660
  661 ENIKAGSVLS GIVLQKTEDS VIVDLGDKVT GVITLGQLCD GDLNKCSKVM NKLRASTKLA 720
  721 EVLVLRKDTS KKLISLSLKK SLVEAAKENR MPINITDLKE GIKYFGFVRN ATTFGVFVEF 780
  781 CDGLVALVPK AYISEEYVPV PSAVYKPQQS VTCVCLSVEL SQEKAFMSFK PLAQKQEKAV 840
  841 EFMESKYDID NPVDETIKKT YDYVAGKITW AVVTSAKASQ LNVDLAANVH GRVDVSEVFD 900
  901 NFGEIVDPNK PLKRFHKGDK IRVRVLGIHD SRNHKFLPIS HRVSPKQFLE LSVRPSILNM 960
  961 EPFSMKEPQF KKGDEVTGFV NNVSKECVWV SLTPSVNGRI PILDLTTDVK ELNSLQKHFF1020
 1021 LGKAIKCYVV NAEDSITLSA IGPLQGFENL TPGSRLVGKV TNVNEAGAIL QLPGHMSGRV1080
 1081 SRIDMFDDYD ILPETKFTRN NLVGVCVLSV DVPNRKVALS ARNSRTQSQP VEIKDKEINS1140
 1141 VDDLKIGDIC RGFVCNVANQ GLFVTIGHNL IARVKIGELF DTFIKDWKPH FHVNQLVKGS1200
 1201 IVGIDNDSKR IEMSLKQSKI KDSSEITKTF ADIAVGSNLD GTVVKVGDYG VLIRIDGTDN1260
 1261 IVGLCHKSEI ADAVVLNISK LYSSGDKVRA HVLDVDSEKR RIALGLKSSY FDSDSDISMS1320
 1321 DNEEDVEMRS EDQSDTSESE VGSKDDVQSE EVENLESAGD EDEEEEPSAL QANGFDWTDG1380
 1381 STVFDKLADD TEDSEDEEDE EPKRKKSKSD RFDDEEKDLD EIPSTAADFE RQLLSSPNSS1440
 1441 LLWISYMAYH LNLNELQEAR EVGKRALSTI NYREEDEKLN VWMALLNLEV AYGTEDSLKE1500
 1501 VFKEACAYCD ALIVYEKLCG ILIKGGKVDL ADEYMQLMLK NFKQVPSVWI QYATFLLNND1560
 1561 KAEKAHGLLE RSLQSLPKSE HVGIIEKFAI LEFKNGDPER GRTIFEGLLS SYPKRLDLWN1620
 1621 VLIDMEMKQD DPSIVRRLFQ RLLALNLSTK KAKFAFKKWL AYEKNIGDDE GAEQVKRRAI1680
 1681 EYVSESHSEN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: SPCC1183.07

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: