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Protein Overview: SPCC285.13c

General Information:
Name(s) found: SPCC285.13c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • nucleoporin Nup60 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 736 amino acids

    Gene Ontology:
    Cellular Component: nuclear pore [ISSLink to PubMed article]
    Biological Process: nucleocytoplasmic transport [ISSLink to PubMed article]
    protein import into nucleus, docking [ISSLink to PubMed article]
    Molecular Function: structural constituent of nuclear pore [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGPIRTLH KGKAARNRTP YDRIAASKDG NHSNGPQTPS KSIFQRAKEW LTPSSWKKAI  60
   61 SIFSSPVVNK HEDSFDSKTD EEYLQNVSTT TEDVSMLINT PVTEKYEQEH RDTSAQATPS 120
  121 IVEQSPNQML ANFFSKKGKT PLNEIEKEGI ISILNKSASP SSSVISPAAS LNRFQTPRAA 180
  181 AISKRESGVS SEPRARTSSL TPGNTPNSAK QWSAFRSTFS PLREQDQLST ISPNSLLPAQ 240
  241 RLSYYGPTLS TPYNRRLRHK RHSTTPISLS NSIAPSLSFQ PKKARYESAN VSFNDTSFTN 300
  301 VPTSSPLHQS TTANHPEKTP SRAAASLLSI LDSKEKNTPS ITAKAGSPQS APSKASYISP 360
  361 YARPGITTSR RRHDQIRPSS EKSEPEKKEP SAFETLEKSS NVQTYKPSLM PEFLEKASTH 420
  421 GSFAKQKEGE QTSLSEKTAL SEPENKTPVF SFKAPSATTD KPSPPVSSIF SFNAPSAAST 480
  481 KPSPAVSSTF SFNAPTTTPS ATSFSIINKE KPARSPNETI DVDLEEEGSG ISAEVEVANE 540
  541 GEDLQKNATE VKASTSEKPV FRFEAVTDEK NSEVSSSNQA SSSTMISQPN TGFSFGSFNK 600
  601 PAGQEEKPQQ RSLFSASFTT QKPELPAAKI EPEVQMTNVA IDQRSFEQAE KSPISVSEST 660
  661 SLVEVEKPSA EGTNEHKQDA TMTLEKTDKQ GSLEEEPFPK FSFTVLPKEN GENLSTMEST 720
  721 QELPKFSFSV LKEEKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] deduced N/A No confident structure predictions are available.
    2 View Details [87..269] deduced N/A No confident structure predictions are available.
    3 View Details [270..357] MSA 4.190995 View MSA. No confident structure predictions are available.
    4 View Details [358..611] deduced N/A No confident structure predictions are available.
    5 View Details [612..736] MSA 3.172992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle