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Protein Overview: SPBC2A9.06c

General Information:
Name(s) found: SPBC2A9.06c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • di-trans,poly-cis-decaprenylcistransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 258 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: protein amino acid glycosylation [ISS]
    Molecular Function: di-trans,poly-cis-decaprenylcistransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDDIFFYLA LWVIQSVYGA WDWAKNWVFW TCSYLLNFLY HHHCSRDLIR RDTKKLKKKP  60
   61 KHIAVIIECV EDGGIEGLIH DACELSAWCV CSNIRELTIY ERKGFLKQSP EAVEKAIYSH 120
  121 LPFYLGGDKC TVHVTNPCSP DEKNQNDCVD LKVHLIAKED GRDAIIDLTR GLADLCTKKV 180
  181 ISSTQVTLEL IDKELKESVI PEPDLLIIFA PLLKLQGFPP WQLRLCEIFH DPILYTTNYL 240
  241 TFFKALVHYS NAEMRLGH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 65.39794 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  1.40194046037281 bayes_pls_golite062009
  • prenyltransferase activity
    		•  1.2102902082955 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.331797220769091 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle