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Protein Overview: vps901

General Information:
Name(s) found: vps901 / SPBC4F6.10 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • guanyl-nucleotide exchange factor Vps901 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: cytosol [ISSLink to PubMed article]
    Biological Process: regulation of catalytic activity [ICLink to PubMed article]
    protein targeting to vacuole [ISSLink to PubMed article]
    Molecular Function: guanyl-nucleotide exchange factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYPSFHEDP TKDESTVAEQ RKGQSNEEKP LIDLNDSLDE QRNAYNEHCK NHDQQPSQQV  60
   61 RNMEDEANQY EQTDSSSDQE VMNEKQSLDK ENRNDNIPHE NNPGQQEINE PIFDFHMFLE 120
  121 QLRSSSAEPV AKYLKSFLSE FTKRRWTVNY QVKLIRDFLK FINEKIEQYE PWASGSQAEI 180
  181 DNAKEGMEKL VLNRLYTSLF SPEIAKSGIP LSSEHSDDVE EDRVLSEKME LFQWITEENL 240
  241 DIKKQKSSSK FFKLAADELR RINDYHAPRD KIICLLNCCK VIFSYLRNVV KEESADMFVP 300
  301 ILIFVVLQAR PAHLVSNIQY IQRFRSPEKL TGEVMYYLST LMGAMSFIET LDCSSLTITE 360
  361 EEFNAQIEKS IKKMEERKLS EKSESKTAVN ENATYKDPVL SRGLSSSIDV STGVALVNLP 420
  421 EELENMKYLQ IDTPESKEYP RSTRPRALLI VALSQLILEK DHAETQTSML VLAIDLPIEY 480
  481 LVHIPRLLPI LPSFMKSSQW MMDYNKMMTC ERQQQRLLRQ LKLKGYKLGK RLKQLRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] deduced N/A No confident structure predictions are available.
    2 View Details [111..379] PSI-BLAST 68.30103 Crystal Structure of the Vps9 Domain of Rabex-5
    3 View Details [380..537] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • protein binding
    		•  1.53503231216012 bayes_pls_golite062009
  • GTPase activating protein binding
    		•  1.51214503459935 bayes_pls_golite062009
  • binding
    		•  1.43845202356718 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.345541740813359 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  0.275905530501797 bayes_pls_golite062009
  • GTPase regulator activity
    		•  0.242420370175624 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
    		•  0.180034469254504 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle