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Protein Overview: SPAC4A8.07c

General Information:
Name(s) found: SPAC4A8.07c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • sphingoid long chain base (LCB) kinase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: endosome [IEA]
    Golgi apparatus [ISSLink to PubMed article]
    endoplasmic reticulum [ISSLink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: sphingoid biosynthetic process [ISSLink to PubMed article]
    calcium-mediated signaling [ISSLink to PubMed article]
    activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway [ISSLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    D-erythro-sphingosine kinase activity [ISSLink to PubMed article]
    diacylglycerol kinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFGLTNNSI KAFEDQKLLH IHQSCVSYPS DTLICSIPVS AKNVDLNIPF KNILWVDKTG  60
   61 PNSVTLSYVS RSSKVATKCW VDFVENSDQF CEYLLDVAYK GIKRSRRFIV FINPHGGKGK 120
  121 AKHIWESEAE PVFSSAHSIC EVVLTRRKDH AKSIAKNLDV GSYDGILSVG GDGLFHEVIN 180
  181 GLGERDDYLE AFKLPVCMIP GGSGNAFSYN ATGQLKPALT ALEILKGRPT SFDLMTFEQK 240
  241 GKKAYSFLTA NYGIIADCDI GTENWRFMGE NRAYLGFFLR LFQKPDWKCS IEMDVVSSDR 300
  301 TEIKHMYEKS KNLAPMSESS DSDKTVSTSP ESHLLTFEIN DLSIFCAGLL PYIAPDAKMF 360
  361 PAASNDDGLI DVVIVYSKQF RKSLLSMFTQ LDNGGFYYSK HLNYYKVRSF RFTPVNTGKR 420
  421 HYFALDGESY PLEPFECRVA PKLGTTLSPV AGFQLLDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] MSA 2.098995 View MSA. Confident ab initio structure predictions are available.
    2 View Details [105..458] PSI-BLAST 46.522879 No description for 2bonA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle