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Protein Overview: SPCC74.02c

General Information:
Name(s) found: SPCC74.02c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • mRNA cleavage and polyadenylation specificity factor complex associated protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 710 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mRNA cleavage and polyadenylation specificity factor complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: mRNA cleavage [ICLink to PubMed article]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNWNSVRNV SSDRQTSKTS ENPPHTSNEY SGKPEFINLS PDLEENLDEK LMSAFPGLEP  60
   61 HVFQHSQSPL SHKDASLLAT MPSVASSNPS LISSGSSQTG SPSQSLSSNK EPSSPGISPS 120
  121 NDSQSQNTNH TSISANPYVN NPSHTSRNPD SGSSLNTASH EVPSSKSDVN VQMLARLKSK 180
  181 SRQKISSSDP LEDLRLTLTE CLNPINIVQA PKECAAILVN LMSNITQDDQ KLVFLDLLKS 240
  241 KVGNSIYSQL VDGGRKLFLP KLRNWFVSAI RSKHDELIHL ILLVLANLPL TTEKLAEVKF 300
  301 GKPILIVKKK STNSVIRQLA ENLSELAEKS FTIEQNRENE KSSTKNDSTV SSSAVVMAPA 360
  361 GPAMAPSASN KPSASSTTKS SNSKSKKKVT SISGTSFFKN LASSTKPTSA SSSTKAPLTK 420
  421 QQTNPSTPLS SIMAGLKGRE KEKDKDSGIS SENVSNNREE LPSFRKRSSS SRQSEEIASL 480
  481 QAENAVFSSD PASNDEKTGN KKRKKKSVSW KPDNDLVQVK FIESLNEEGA ASVKTPHIYG 540
  541 NARDMDRQEA RVAFGSHVED DVENEIIWYK PVPIKFEISK DEIHPRGYKC GGNERNLTPE 600
  601 ATSEIEREKN ESKDISTFNI ILDLPVIREF DDSRPPAHIK LVSSDTQATT ELGFNGLVQQ 660
  661 VSENNTNAYS ATSNSQLSSI FSNLSSSISD ASSNVLQNPS LSIPNYSNAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] deduced N/A No confident structure predictions are available.
    2 View Details [128..225] MSA 1.003975 View MSA. No confident structure predictions are available.
    3 View Details [226..395] deduced N/A No confident structure predictions are available.
    4 View Details [396..530] deduced N/A No confident structure predictions are available.
    5 View Details [531..710] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle