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Protein Overview: SPBC2G5.03

General Information:
Name(s) found: SPBC2G5.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • ATP binding protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 335 amino acids

    Gene Ontology:
    Cellular Component: cytosol [TASLink to PubMed article]
    cytosolic tRNA wobble base thiouridylase complex [IDALink to PubMed article]
    Biological Process: regulation of translational fidelity [IMPLink to PubMed article]
    cell morphogenesis [IMPLink to PubMed article]
    wobble position uridine thiolation [IDALink to PubMed article][IMPLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    protein binding [IPILink to PubMed article]
    tRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKLCQLCN ERRPALVRPK TGQKICKECF YYVFETEIHN VIIENKLFVR GERVGIGASG  60
   61 GKDSTVLAYV MKLLNERYDY GLELYLISVD EGIRGYRDDS LDTVKRNQQQ YGLPMKIVSY 120
  121 ADLYDGWTMD NVVARIGTKN NCTYCGVFRR QALDRAALSL DIHHLVTGHN ADDIAETILM 180
  181 NLLRGDVARL PRSTEITTQS DSSPTKRSKP FKYSYEKEIV LYAHYKKLDY FSTECTYSPE 240
  241 AFRGTARAMI KQLENIRPSS ILDIIYSGES MQLASSVQEQ LPQQTTCERC GFISSNRICK 300
  301 ACMLLEGLNK GITGLGLGSD RKTKKLQSQI PACAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..335] PSI-BLAST 47.69897 GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-nitrogen bonds
    		•  4.5241303311086 bayes_pls_golite062009
  • ligase activity
    		•  3.71561290487771 bayes_pls_golite062009
  • DNA binding
    		•  1.07561751049838 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.0681685328021 bayes_pls_golite062009
  • binding
    		•  0.915602461727954 bayes_pls_golite062009
  • catalytic activity
    		•  0.828867994386867 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.475055910258246 bayes_pls_golite062009
  • transferase activity
    		•  0.0776944314618701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle