YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ker1

General Information:
Name(s) found: ker1 / SPBC1718.03 [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • gi|74625417|sp|Q9P7P1.1|RPA14_SCHPO RecName: Full=DNA-directed RNA polymerase I subunit rpa14; Short=RNA polymerase I subunit A14; AltName: Full=DNA-directed RNA polymerase I 17 kDa polypeptide; AltName: Full=Nucleolar protein ker1 [NCBI NR]
  • gi|7106060|emb|CAB75993.1| DNA-directed RNA polymerase I complex subunit Ker1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|20387240|dbj|BAB91320.1| neucleolar protein KER1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113241|ref|NP_596449.1| RNA polymerase I transcription factor subunit Ker1 [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50331 hypothetical coiled-coil protein [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • DNA-directed RNA polymerase I complex subunit subunit Ker1 [Sanger Pombe]
  • DNA-directed RNA polymerase I 17 kDa polypeptide (EC 2.7.7.6) (A14) (Nucleolar protein ker1) - Schizosaccharomyces pombe (Fission yeast) [Swiss-Prot]
  • DNA-directed RNA polymerase I subunit rpa14 OS=Schizosaccharomyces pombe GN=ker1 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN: Q9P7P1; [pompepVF.fasta]
  • Hypothetical coiled-coil protein (Neucleolar protein KER1) [pompep4896]
  • |ker1||nucleolar protein (AB079137) [pompepnew.fasta]
  • SPBC1718.03 protein (Neucleolar protein KER1) [4896.FASTAC]
  • |ker1||localization nucleolus|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical coiled-coil protein [Schizosaccharomyces pombe]gi|7106060|emb|CAB75993.1| SPBC1718.03 [Schizosaccharomyces pombe]gi|11359071|pir||T50331 hypothetical coiled-coil protein [imported] - fission yeast (Schizosaccharomyces pombe)gi|20387240|db [nrdb_11152004_Chlamydomonas]
  • |ker1||RNA polymerase I subunit A14 |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9P7P1) Hypothetical coiled-coil protein (Neucleolar protein KER1) [pompep4896_normal_reversed]
  • |ker1||DNA-directed RNA polymerase I complex subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • DNA-directed RNA polymerase I 17 kDa polypeptide (A14) (Nucleolar protein ker1) [nr-271106-contam.fasta]
  • neucleolar protein KER1 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPBC1718.03 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC1718.03 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • DNA-directed RNA polymerase I subunit rpa14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ker1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 147 amino acids

    Gene Ontology:
    Cellular Component: DNA-directed RNA polymerase I complex [IDALink to PubMed article]
    nucleolus [IDALink to PubMed articleLink to PubMed article]
    Biological Process: transcription from RNA polymerase I promoter [IGILink to PubMed article]
    Molecular Function: DNA-directed RNA polymerase activity [ICLink to PubMed article]
    protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATECPPKMI LRKSEKLDKD ASSKFLNRYI QTIERFQDEK SGSESVLSQL NRVLMYLKGE  60
   61 EIPLISLNLP VQGPPTEELI IPPEEMLETK EEESLKHARE ENDDLHLDKE TKKRLKKEKK 120
  121 KAARREKEEA RKAKADTTQG VGEKEQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] Pfam 81.886057 No description for PF08203.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle