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Protein Overview: SPCC757.12

General Information:
Name(s) found: SPCC757.12 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • alpha-amylase homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 625 amino acids

    Gene Ontology:
    Cellular Component: cell wall [ISSLink to PubMed article]
    external side of plasma membrane [ISSLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    cell surface [ICLink to PubMed article]
    anchored to membrane [IEA]
    Biological Process: fungal-type cell wall biogenesis [ISSLink to PubMed article]
    cell morphogenesis [ISSLink to PubMed article]
    cellular polysaccharide catabolic process [ICLink to PubMed article]
    extracellular polysaccharide metabolic process [IC]
    Molecular Function: alpha-amylase activity [ISSLink to PubMed article]
    calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSKIALFS LFALFGLPTS LAKSSEEWRD RIIYQVITDR FAVDSDNTPD CSFDDSSYCG  60
   61 GTWSGIRSKL DYIQGMGFNA IWISPVEKNL EGSYGSDGEA YHGYWNTDFT QLNEHFGSED 120
  121 DLIDLITDMH NRDMWIMFDA LANSMAIPGP TDNISYSNLV PFNDSSYFHP YCWIDYGSNN 180
  181 NTDIEDCWTG DDNVILADLD IESTNVADYL HEHIHDMVER YQIDGIRIDA VKQMNPEFFP 240
  241 NYTSAAGVFA IGEMFSYDPN VSCSVRNYLD SITSYPIRQG IEFAFNYTGA AFEYLQEIDT 300
  301 QFQQACEGQD MSVIGNFLEN HDLPRYTSIT NDTSQDIGAI VFLLLHTGIP IIYYGEEQRL 360
  361 PGGSDTPENR AALWNYGYDT DANYYQTIRT AIALRKQAIS DSDSWTTDSH SYLDYDLRHA 420
  421 VVRKGDVLGV YTNYESSSDN VTYDVSSNFD DGTVLREVLS NTTTTVGSSG ALHVTVVSGL 480
  481 PQVYYPEASL TSFGNFLGTA TSYSSASASY PSTSMSASLS SVHTSSATSS SKSSSSSSSR 540
  541 SGSSSSSSSR SGSTSSSGSS HTITSTSQSV HTSGSSTSTS SVAVTSTAYS SSSSSSSSSS 600
  601 IESSANAVRV SILGVAAFIA IVLFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..489] PSI-BLAST 84.0 Fungal alpha-amylase; Fungal alpha-amylases
    2 View Details [490..625] FFAS03 1.43 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  5.36248919165223 bayes_pls_golite062009
  • glucan 1,3-beta-glucosidase activity
    		•  4.9497656520055 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  4.55801959095491 bayes_pls_golite062009
  • hydrolase activity
    		•  4.05312354194822 bayes_pls_golite062009
  • chitinase activity
    		•  4.02601525947212 bayes_pls_golite062009
  • glucosidase activity
    		•  3.48584664974971 bayes_pls_golite062009
  • beta-glucosidase activity
    		•  2.93854518942359 bayes_pls_golite062009
  • alpha-amylase activity
    		•  2.09193270404736 bayes_pls_golite062009
  • amylase activity
    		•  2.03484942782894 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • transporter activity
    		•  1.28975867300692 bayes_pls_golite062009
  • binding
    		•  1.08189849662259 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.06875155491269 bayes_pls_golite062009
  • hyalurononglucosaminidase activity
    		•  0.799539531748231 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.798668027833638 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.543615761700598 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  0.502835520523619 bayes_pls_golite062009
  • alpha-1,3-glucan synthase activity
    		•  0.434118980237671 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.369121784919131 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.28185708488534 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.247544462005515 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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