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Protein Overview: rrn6

General Information:
Name(s) found: rrn6 / SPBC3B8.11 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • RNA polymerase I transcription factor subunit Rrn6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 868 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    RNA polymerase I transcription factor complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: transcription from RNA polymerase I promoter [ISSLink to PubMed article]
    regulation of transcription [ICLink to PubMed article]
    Molecular Function: RNA polymerase I transcription factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWPIDAIS KKPSVSLDYG IIGACQLLNP SGYHRAEKVE NNEWTFARYD SYTGVELVDL  60
   61 DKRWDILSLN PNYKLPKLTE LPAEATNSTR KATSSSFGLS VCRYVPRNLF STLAKESQLA 120
  121 SSAESIYNPH ILNTFCLGKT APSDKNRYTT TECLACSKIS NETAENLLFL CLSSPWIFRA 180
  181 SPTLQNTATF EEFPFYLNVS AFEFAEDPIW KFSQPVRQLV FSNGEPSLLF ALSSCELVIF 240
  241 QVTYDLMFLD EPNTPGCLSA IPLRFLYADD VYNSDSFANV SVHPTDNSFF LTTSSSGRWT 300
  301 IWQFLDDGYR ECFGSSFKES LQQALCSAPT SSIAYHEEEI NPDNTIYRAK WEEYFGGVIL 360
  361 HNAFFILHVS LGEVPDFHLL FHCSSDVRIL QVVNESMPIK SEFFILTTES VLWMDIQHPQ 420
  421 KPLLEWKHNR KLDPTLKITV TATFSQNIYV SVYSQMNGVV QQIHFSKDRA LPVSGSHPFL 480
  481 LLNEVQVPIR SLIIQPCYFF ESSEFDRQGP FDSPFWSAII DKADGSLSLH ILCEKSSLKI 540
  541 YNLEELTGSS QVAMKFKTIT PSVNTSEDDS ANDQEIISTP NSDFQQLSLS RLYHVLCSNR 600
  601 NKKNTITLDE FASKVPDFVE AFDSINHDVI ITLSELYDGF PLKGTFTNVA EIISHLEGTE 660
  661 LSFYFPYMFG INYNNASFFY TSVDSIASLI HRRWESNTDK SVEIPCFQSS QRRSIKNVIH 720
  721 YLFLSSIGVS REKIFDPSLS RKEIDSTDLL TFIKPFYDTE GLELNEDVRN ILENWEIGKI 780
  781 SSTYVIGDSA VETEDPSSSQ FSDFYISQQQ SSVLPSSQIA TVFSQEDVPN FSSLYSESSS 840
  841 QTIPIMSQVV SGKYGSRPSK KKKKRSGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] deduced N/A No confident structure predictions are available.
    2 View Details [143..342] deduced N/A No confident structure predictions are available.
    3 View Details [343..510] deduced N/A No confident structure predictions are available.
    4 View Details [511..570] deduced N/A No confident structure predictions are available.
    5 View Details [571..868] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle