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Protein Overview: SPAC25B8.11

General Information:
Name(s) found: SPAC25B8.11 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • transcription factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 654 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]
    transcription factor activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLILTPSN NGTERPYRSR KTRPCDNCRL RKSRCVVESI GNPCLLCTQL KIPCTYHLPP  60
   61 IKRNKQKKQQ DSVSDDTPSE ATTTTNDDRD PKYNALGNNL DAVRGKVISP TQGSDARGPD 120
  121 GRQVPLNLAG ITEMYHTSDD KFDKLGLDDS LNYPYVLGPT CDSDIDLIRE YFSFENGVCS 180
  181 FDNMTVKYVS TSSKSPVMYI LDPAYENDRH SDFSRYDHAL HDLLSTYIDE ATGRTLVNLY 240
  241 FSHVHPSYPI LHGPRFLLSY KNGSRNVPSI LLAALYSVAL TYWPSDSRSF GAPPLDQRKM 300
  301 WTIVEEGLNF HFTQPRLSTI QAALLYLISR PLHNMYSLSS ILSRTTVLSQ LLGFNHDCTE 360
  361 WKIPNEEKTI RKRIWWAIFI ADKWYSMYFG LATNIHEDDF VVPKIESDES LPLEITSSHS 420
  421 FKTFLKMIEL SSLLQDILQD LFTVRALTRH SKNNRSISYQ IIGFFTRLNS IRPVEFTEPA 480
  481 LGVASLKIQF DAVEILLWKT ALRFNLPDFQ SADDLFVCVE KSVSNFVQIT ANSSGDFFWP 540
  541 YAGFHFSTLV SLLIRLHLDF HTNNTYGARA FSLLDAFVRH CITLHEAGFD FVEMAIRRSS 600
  601 SLLKELGKDH PHLLALRDDI FNSNDSRGEE AYNHVPEQLF DPWNPHSWTF PKSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 4.69897 PUT3
    2 View Details [116..315] deduced N/A No confident structure predictions are available.
    3 View Details [316..417] Pfam 21.346787 No description for PF04082.9 was found. No confident structure predictions are available.
    4 View Details [418..654] MSA 2.389996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle