YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPCC11E10.09c

General Information:
Name(s) found: SPCC11E10.09c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • alpha-amylase homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    cell surface [ICLink to PubMed article]
    Biological Process: cellular polysaccharide catabolic process [ICLink to PubMed article]
    extracellular polysaccharide metabolic process [IC]
    Molecular Function: alpha-amylase activity [ISSLink to PubMed article]
    calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLICSILPK KEPSYLKLWR KQVIYQVLTD RFALDEDNFY AKASGNLYLG GTWKGITRNL  60
   61 DYIKSLGCTA IWISPIVKNI SETTDCGQAY HGYWAQDMTQ LNENFGTEED LKELVNAIHE 120
  121 KNMLCMVDIV VNHMGHAGSK PVNFLLYQPF NSGKYYHNWQ FVQNYDDPHE TITGWLGDSH 180
  181 VNLPDIRTEK NEVRKFFQNW VSDLIKRYQF DGIRLDTAKH VEKSFFPTFI EAANVFTTGE 240
  241 VFHGDPKVVG DYQKYLPSTL NFPLFFQLRE TFLDPKHSMF SFYDKAVLDV RHYFKDVTVL 300
  301 CNFLENHDFP RFFHETKDIA LALNALTALI FMDGIPIIYY GQEQMFDGGS DPDNREGLWK 360
  361 SKYNTSNPMF RHLSSMIRTR QNLVETYPEF TYVLSFQLYI DDSVYVFTRP GVIIAISNEG 420
  421 STSSFKVEID LKEHWKEVPS SFTDILTQKT IPCKDHKLKI KSKSGLPKIL ISSDPSFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..478] PSI-BLAST 87.154902 No description for 2guyA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  4.55801959095491 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  4.29108420555514 bayes_pls_golite062009
  • hydrolase activity
    		•  2.98140830993539 bayes_pls_golite062009
  • alpha-amylase activity
    		•  2.09193270404736 bayes_pls_golite062009
  • amylase activity
    		•  2.03484942782894 bayes_pls_golite062009
  • chitinase activity
    		•  1.947859226275 bayes_pls_golite062009
  • glucosidase activity
    		•  1.92306554001182 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • binding
    		•  0.63693798355947 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  0.502835520523619 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.28185708488534 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle