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Protein Overview: tim16

General Information:
Name(s) found: tim16 / SPBC713.10 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • TIM23 translocase complex subunit Tim16 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 128 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    presequence translocase-associated import motor [ISSLink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: protein import into mitochondrial matrix [ISSLink to PubMed article]
    Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPRAVGRF IIVGSQVMSK AFVQAYKQMI ANAAQQSTGQ AAASKSSTAV RRGEMTIQEA  60
   61 GSILNIKPES LEEGELEKRF QKMFEINDPK KGGSFYLQSK VFRAHEKLKS ELDQKIQEQS 120
  121 PAKPTSSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 20.0 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.0541759325193 bayes_pls_golite062009
  • protein binding
    		•  1.63230390088325 bayes_pls_golite062009
  • transporter activity
    		•  1.29863098651348 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.91241047562027 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.812144232432417 bayes_pls_golite062009
  • heat shock protein binding
    		•  0.796066295738949 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle