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Protein Overview: SPAC4D7.04c

General Information:
Name(s) found: SPAC4D7.04c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • cis-prenyltransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [ISSLink to PubMed article]
    Biological Process: dolichol biosynthetic process [ISSLink to PubMed article]
    protein amino acid glycosylation [ISSLink to PubMed article]
    protein amino acid N-linked glycosylation [NASLink to PubMed article]
    Molecular Function: prenyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLSGWFIH CPPLQWTLDQ LETMMINTIK RGKVPQHIAF VMDGNRRWAR QRRMETIEGH  60
   61 SSGFEALKSL LKVCLKLGVK EVSAFTFSIE NFKRSKYEVD MLMEIAKNSL TQITAHGDLV 120
  121 DQYGIRIRIV GDLSRLQPDV LETALKAVEI TKHNTKATLN VCFPYTSRHE IATSVQSIVK 180
  181 MAEDGTITPE DIDEDIFEKN LLIKDSLPLD LLIRTSGVER LSDFMLWQCH KNTEIKFIDF 240
  241 YWPDFSIWKF FPMLIQYQLQ NQPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 90.09691 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.40397054534951 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • transferase activity
    		•  1.42376896518855 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • dehydrodolichyl diphosphate synthase activity
    		•  0.761527128946352 bayes_pls_golite062009
  • binding
    		•  0.747530931796963 bayes_pls_golite062009
  • protein binding
    		•  0.746384987072271 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle