YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: pcd1

General Information:
Name(s) found: pcd1 / SPAC6G9.05 [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • pir||T39067 hypothetical protein SPAC6G9.05 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|2842696|sp|Q92350.1|YDH5_SCHPO RecName: Full=Probable nudix hydrolase C6G9.05 [NCBI NR]
  • gi|19115026|ref|NP_594114.1| peroxisomal coenzyme A diphosphatase (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|1644317|emb|CAB03607.1| coenzyme A diphosphatase (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • coenzyme A diphosphatase [Sanger Pombe]
  • Probable nudix hydrolase C6G9.05 OS=Schizosaccharomyces pombe GN=SPAC6G9.05 PE=2 SV=1 [Swiss-Prot]
  • MUTT NUDIX FAMILY HYDROLASE; SIMILAR TO S. CEREVISIAE PCD1 A PEROXISOMAL NUDIX HYDROLASE WITH DIPHOSPHATASE ACTIVITY SPECIFIC FOR COENZYME A AND COA DERIVATIVES: Q92350; [pompepVF.fasta]
  • MUTT NUDIX FAMILY HYDROLASE; SIMILAR TO S. CEREVISIAE PCD1 WHICH IS A PEROXISOMAL NUDIX HYDROLASE WITH DIPHOSPHATASE ACTIVITY SPECIFIC FOR COENZYME A AND COA DERIVATIVES: Q92350; [pompepV13]
  • Hypothetical UPF0035 protein C6G9.05 in chromosome I [pompep4896]
  • |||Mutt nudix family hydrolase [pompepnew.fasta]
  • |||Nudix family hydrolase|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|1644317|emb|CAB03607.1| SPAC6G9.05 [Schizosaccharomyces pombe]gi|2842696|sp|Q92350|YDH5_SCHPO Hypothetical UPF0035 protein C6G9.05 in chromosome Igi|7491231|pir||T39067 hypothetical protein SPAC6G9.05 [nrdb_11152004_Chlamydomonas]
  • (Q92350) Hypothetical UPF0035 protein C6G9.05 in chromosome I [pompep4896_normal_reversed]
  • |pcd1||coenzyme A diphosphatase |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC6G9.05 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC6G9.05 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Probable nudix hydrolase C6G9.05 [nr-271106-contam.fasta]
  • Probable nudix hydrolase C6G9.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G9.05 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: nucleoside diphosphate metabolic process [IEA]
    coenzyme metabolic process [NASLink to PubMed article]
    Molecular Function: magnesium ion binding [IEA]
    pyrophosphatase activity [ISSLink to PubMed article]
    manganese ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKLRWKGH QRFLTRQNSL VGFIWSPLKN TFSKRNSILN NQVCFEAIKY IQRHYFSSQS  60
   61 HHVTYLHQSP LEKLVSNGVV NENGDLTMDS LSHQIYLLHK NRPTLPLKPT NQPTRFASVL 120
  121 MPLVNTSQGA SLLLTQRSPN LRSHAGQMCF PGGRVEPSDG SHYYAALRET YEEIGFLPNF 180
  181 FTYLTTFPPL FTRDEKTEIR AYLAFSVQTS LPSLGTGEVK DLFYVPLTSF LNPKHQKISR 240
  241 FRNTDLLYVE FNIDKIPRIW GITAVILNMY LNSICPDALI SIPKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..285] PSI-BLAST 21.0 Coenzyme A pyrophosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.49075808737475 bayes_pls_golite062009
  • binding
    		•  0.219596749019403 bayes_pls_golite062009
  • hydrolase activity
    		•  0.214635043348567 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0715631252684563 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.46

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle