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Protein Overview: SPCC285.14

General Information:
Name(s) found: SPCC285.14 [Sanger Pombe]
Description(s) found:
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  • gi|9979445|sp|O74501|YCRE_SCHPO Uncharacterized protein CC285.14 [NCBI NR]
  • gi|7491883|pir||T41260 hypothetical protein SPCC285.14 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3581914|emb|CAA20853.1| TRAPP complex subunit Trs130 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075842|ref|NP_588342.1| TRAPP complex subunit Trs130 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • TRAPP complex subunit Trs130 [Sanger Pombe]
  • Uncharacterized protein CC285.14 OS=Schizosaccharomyces pombe GN=SPCC285.14 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE TRAPP (TRANSPORT PROTEIN PARTICLE) COMPLEX; POSSIBLY INVOLVED IN VESICULAR TRANSPORT BETWEEN THE ER AND THE GOLGI; SIMILAR TO S. CEREVISIAE TRS130: O74501; [pompepVF.fasta]
  • PUTATIVE COMPONENT OF THE TRAPP (TRANSPORT PROTEIN PARTICLE) COMPLEX INVOLVED IN VESICULAR TRANSPORT BETWEEN THE ER AND THE GOLGI; BY SIMILARITY TO YEAST TRS130: O74501; [pompepV13]
  • Hypothetical protein CC285.14 in chromosome III [pompep4896]
  • |||putative TRAPP (Transport protein Particle) complex [pompepnew.fasta]
  • |||TRAPP (predicted)|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|3581914|emb|CAA20853.1| TRAPP (predicted); involved in intracellular protein transport (predicted); similar to S. cerevisiae YMR218C [Schizosaccharomyces pombe]gi|7491883|pir||T41260 hypothetical protei [nrdb_11152004_Chlamydomonas]
  • |||TRAPP |Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (O74501) Hypothetical protein CC285.14 in chromosome III [pompep4896_normal_reversed]
  • |trs130||TRAPP complex subunit Trs130 |Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC285.14 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Hypothetical protein CC285.14 [nr-271106-contam.fasta]
  • hypothetical protein SPCC285.14 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |||TRAPP complex subunit Trs130 |Schizosaccharomyces pombe|chr 3|||Manual [spombe-190209-contam.fasta]
  • Uncharacterized protein CC285.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC285.14 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 1150 amino acids

    Gene Ontology:
    Cellular Component: TRAPP complex [ISSLink to PubMed article]
    nucleus [RCALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [ISSLink to PubMed article]
    intracellular protein transport [ICLink to PubMed article]
    regulation of Rab GTPase activity [IC]
    Molecular Function: Rab guanyl-nucleotide exchange factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKKPIVQY YDPFDLWPSI ATDIESKIPL RNLQWVESYQ YKKHTITSLD LEFLPWLEEF  60
   61 SSQDTSKDPT LLNIPLVNML FLPEQDGEIY KTQHKPLATK WFQKVSKNEN QSWMIVLVAE 120
  121 AQQAKRSNSL RRTHSRSSSY FAVKSTIDRV RGDFNTGNIN HCVRLDYVRF GTPDAEGWNE 180
  181 FLKCLEWAVL SSLDSRFLQL SEQIRSIKLF DSSIFSDYLL FFLQKERLAA SFFDLVLYRE 240
  241 SLEQCEDMFS TLSKIISAID GKKENISKYL GEGSDAQPDL KDFNSSFLIL GSRYNTLHNL 300
  301 LADGDFTLFH FTLFLLSKII LLNLKISDYE KAFSTLQQAL LFLTSSFFNE FVQNNLEIIA 360
  361 AFNYDCYTLL FKKITEAIHN NDTPIPLCCA KILLYARRQL TRMARWNNLI DDSSPLLWRE 420
  421 PSFPLIEHHD NSLLDNRFQK LSETISSTSS FLSEYYRLSS EALSIFKAYK NRYSFVNTAC 480
  481 DTGLAQYLLE DYENAYASLK NVDVQTAWSN DPLEEKWSKF YVDLLEKLEK FDEALEFASA 540
  541 ISKGKVSIYN KNKILELSKK TAKSKVWNLD DFFTIEIPHM MAVVPHDDGI NLSFMCESKV 600
  601 FDLESVDSVT CNYVLSSSKN PMNLLFTLHN SITDGKLNVH CNDIIPGRYH LKTIVFKLKD 660
  661 SVLSFQKDCL HSNKQIEVLN PTKHSNHLYI LQSKISQQFQ NDGIFACIPI MFGERFYKAS 720
  721 CSEIKLSYIE NSGFTNLEKS FLSEESHCGL ESKTDSLVIK NIQKVPGVAK LYIPLTNTPV 780
  781 EGNEFLINLS YILESGQTVR FGKVLHIENA GIVEANCEKT NNMRDPLTST IFLHIQPKEP 840
  841 IIFCSWNCMR KTKQGTYDNV FDIPYNIPVL SPMDCFTSCH FDSDMSIDLK FSMNCLRLAD 900
  901 VVFMKLCVNI WERFDFIDIE HIMPLLDHAC QQISLSNITQ GTVVLPEEIR KLNGKKILNS 960
  961 FFDNEELRNE FSEFIQHLES EVSFNSLRSF VQEFEKKERL KNLPFYFSLH QTIGPLPFKD1020
 1021 EMQSTTIEYI WKIPQKVLLN KPTEITLTFL RSLTHSKKEK QGQSFEIFYN FPAYTTTILF1080
 1081 AGPTQRKIVW EKNQTTAQEQ VTAVFLTAGR VMLPEVVVHS KDDDISILKN TKYTLVGRPL1140
 1141 NDQPDLDYAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123] MSA 2.034994 View MSA. No confident structure predictions are available.
    2 View Details [124..225] MSA 1.034995 View MSA. No confident structure predictions are available.
    3 View Details [226..392] MSA 2.035975 View MSA. No confident structure predictions are available.
    4 View Details [393..618] deduced N/A No confident structure predictions are available.
    5 View Details [619..855] deduced N/A No confident structure predictions are available.
    6 View Details [856..1015] deduced N/A No confident structure predictions are available.
    7 View Details [1016..1150] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle