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Protein Overview: dbp3

General Information:
Name(s) found: dbp3 / SPBC17D1.06 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ATP-dependent RNA helicase Dbp3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 578 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: rRNA processing [ISSLink to PubMed article]
    ribosomal large subunit assembly [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    RNA binding [IEA]
    ATP-dependent RNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFCFRILIL YISLSIDNNY LVTTLISLKE NVFLHIFTLT FLFKAFLLKM AKRSVEELKR  60
   61 SADEEASVKR KEKKSKHEHK KHKKDKPSAD KDRISKKDKK KSKKGKSKTK EESIEINAEE 120
  121 GAKIAQPAIG SANASNHNDE EAYDRYIKKH NISFADPKSS ENLLPILQFD ELDVSAKLRE 180
  181 GLKNYKEPTP IQAATWPYLL AGRDVVGIAE TGSGKTVAFG IPALQYLNGL SDNKSVPRVL 240
  241 VVSPTRELAI QTYENLNSLI QGTNLKAVVV YGGAPKSEQA RAAKNASVII GTPGRLLDLI 300
  301 NDGSIDCSQV GYLVLDEADR MLDTGFEQDI RNIISHTPDP TRNGSRQTVF FSATWPESVR 360
  361 ALAATFLKDP VKITIGSDEL AASQNITQIV EILDDPRSKE RMLDNLLRKH LSSGGKDDKI 420
  421 LIFVLYKKEA ARVEGTLARK YNVVGIHGDM SQGARLQALN DFKSGKCPVL VATDVAARGL 480
  481 DIPKVQLVIN VTFPLTIEDY VHRIGRTGRA NTKGTAITFF TPQDKSHAGE LVNVLRQAKQ 540
  541 DIPEGLFKFG TAVKPKLNAY GSRVVDVPVK AATKIVFD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] deduced N/A No confident structure predictions are available.
    2 View Details [127..578] PSI-BLAST 72.0 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle