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Protein Overview: SPBC31F10.10c

General Information:
Name(s) found: SPBC31F10.10c [Sanger Pombe]
Description(s) found:
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  • pir||T40213 hypothetical protein SPBC31F10.10c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|2226421|emb|CAB10087.1| zf-MYND type zinc finger protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113364|ref|NP_596572.1| zf-MYND type zinc finger protein [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|10720361|sp|P87311.1|YB2A_SCHPO RecName: Full=MYND-type zinc finger protein C31F10.10c [NCBI NR]
  • zf-MYND type zinc finger protein [Sanger Pombe]
  • MYND-type zinc finger protein C31F10.10c OS=Schizosaccharomyces pombe GN=SPBC31F10.10c PE=2 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; ZF-MYND TYPE; POSSIBLY INVOLVED IN REGULATION CELL POLARITY; SIMILAR TO S. CEREVIIAE MUB1: P87311; [pompepVF.fasta]
  • PUTATIVE ZINC FINGER PROTEIN WHICH MAY BE INVOLVED IN REGULATION CELL POLARITY BY SIMILARITY TO YEAST MUB1: P87311; [pompepV13]
  • Hypothetical protein C31F10.10c in chromosome II [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|2226421|emb|CAB10087.1| SPBC31F10.10c [Schizosaccharomyces pombe]gi|10720361|sp|P87311|YB2A_SCHPO Hypothetical protein C31F10.10c in chromosome IIgi|7491593|pir||T40213 hypothetical protein SPBC31F10.1 [nrdb_11152004_Chlamydomonas]
  • (P87311) Hypothetical protein C31F10.10c in chromosome II [pompep4896_normal_reversed]
  • |||zf-MYND type zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC31F10.10c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC31F10.10c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • MYND-type zinc finger protein C31F10.10c [nr-271106-contam.fasta]
  • MYND-type zinc finger protein C31F10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC31F10.10c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 574 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRESNVSIVW NNKASVTINT VLYDRRALDC DSEMSLMNSL SHLVYLTSTS PKIREILTMD  60
   61 GGLMRLMNIL RAGRGQTFAR MTIWQLALQC VVNVGIRGSE AIRIRVVEAG IVPIVVTLLD 120
  121 DFLFALESVV SHHSRFQFSL TPSTTPPPSS ASAPFPINSN ISNSLDSVSQ HNSSADSLFV 180
  181 NGDVPSPFGA STASSSSRRV YSVDLRDSGD VQLPNQSTFR HSVNRDLLGS SSTTSHDRSS 240
  241 GSIYSNDSFQ DPRVQANSPL TIQRISSAAP STPTSTENVN YNMTTPSSPS YSRQTGPASE 300
  301 TINDEIDSPN FFFPTPLNIM TTTQDSSRDV QLSLNNVQSQ ALNNRQRRNQ LLPGVPSTSA 360
  361 LLDGRRPENV VDYHGIASFF DNFDKKINKL PREEDILFGL QILAYTSKNY FHMRPYFESS 420
  421 KDVPSLRMSP LRSGSKTWNI FQLVEQFTLK FYPPQVQYWA RAIMNNYCRK DESHGGIRRC 480
  481 ANLLCNKWEE HSRQFAKCRR CRRTKYCSKE CQHQAWPGHS RWCRVIHKDG RNSKRESSKI 540
  541 NSVTESESTA SPAASVIPVG TESVTSSTQS DSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] MSA 1.137961 View MSA. No confident structure predictions are available.
    2 View Details [130..373] MSA 6.174995 View MSA. No confident structure predictions are available.
    3 View Details [374..453] deduced N/A No confident structure predictions are available.
    4 View Details [454..574] PSI-BLAST 13.045757 No description for 2oddA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle