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Protein Overview: SPAC4H3.08

General Information:
Name(s) found: SPAC4H3.08 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • short chain dehydrogenase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    peroxisomal matrix [ISS]
    Biological Process: fatty acid beta-oxidation [ISS]
    cellular response to stress [IEPLink to PubMed article]
    fatty acid metabolic process [ISSLink to PubMed article]
    Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity [ISS]
    enoyl-CoA hydratase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPVPSTQTQ KWPGKHADLD PEPSLLRYCD GRVHVGSGKL AEKKTLLTGG DSGIGKAAAV  60
   61 MFAREGSDLV ISCLPEERDD AEVTRDLIER EGRNCWIWEG KLDKSDNCRD LVDFALKKLG 120
  121 WIDVLVNNIA YQQVAQSIED IDDEQWDLTF KTNIFSFFWV TKAAISHMKS GSSIVNCSSI 180
  181 NAYVGRPDLL DYTSTKGAIT AFTRGLSNQY AQHGIRVNAV APGPIYTPLV SSTFPKEKIE 240
  241 LSDQVPLGRM GQPVEVASCY LFLACSDGGY MTGQTLHPNG GTVINN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 62.0 No description for 2p68A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle