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Protein Overview: phf2

General Information:
Name(s) found: phf2 / SPAC30D11.08c [Sanger Pombe]
Description(s) found:
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  • pir||S62566 PHD finger protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19114121|ref|NP_593209.1| PHD finger containing protein Phf2 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|1351661|sp|Q09908.1|PHF2_SCHPO RecName: Full=SWM histone demethylase complex subunit phf2; AltName: Full=PHD finger domain-containing protein phf2 [NCBI NR]
  • gi|1065895|emb|CAA91894.1| PHD finger containing protein Phf2 [Schizosaccharomyces pombe] [NCBI NR]
  • PHD finger containing protein Phf2 [Sanger Pombe]
  • Uncharacterized protein C30D11.08c OS=Schizosaccharomyces pombe GN=SPAC30D11.08c PE=2 SV=1 [Swiss-Prot]
  • SWM histone demethylase complex subunit phf2 OS=Schizosaccharomyces pombe GN=phf2 PE=2 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; ZF-PHD FINGER: Q09908; [pompepVF.fasta]
  • PHD FINGER PROTEIN: Q09908; [pompepV13]
  • Hypothetical protein C30D11.08c in chromosome I [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • PHD finger protein [Schizosaccharomyces pombe]gi|1065895|emb|CAA91894.1| SPAC30D11.08c [Schizosaccharomyces pombe]gi|2130407|pir||S62566 PHD finger protein - fission yeast (Schizosaccharomyces pombe)gi|1351661|sp|Q09908|YAJ8_SCHPO Hypothetical protein [nrdb_11152004_Chlamydomonas]
  • (Q09908) Hypothetical protein C30D11.08c in chromosome I [pompep4896_normal_reversed]
  • |phf2|swp2, saf60|PHD finger containing protein Phf2|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC30D11.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC30D11.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |phf2|swp2, saf60|Lsd1/2 complex PHD finger containing protein Phf2|Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • SWM histone demethylase complex subunit phf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phf2 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Lsd1/2 complex [IDALink to PubMed article]
    Biological Process: cellular response to heat [IEPLink to PubMed article]
    histone H3-K9 demethylation [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    nucleosome binding [IDALink to PubMed article]
    small conjugating protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNSSYYDDD GGSFEAASYP FQFDGSRRFP NDLHPTMFEG EESNQNGGSV LIDQAFQDIQ  60
   61 NPNVNSNMHL ENQFQHFHEP NKESGAFGSY KNDDVAKEIE SSKNQETDAK SEQAPFTEDA 120
  121 SSSNYAHHRS ADSQTKSALP PNVPASSSPL PPMSIAMNIA RKRSWPASLA IERDNTADAL 180
  181 FSTEDGREEQ FNLEGVKTKS GRKVHRPNHF DPLVKLPTRR RGPGRRPVVA LAMKCSVCQR 240
  241 LQSPPKNRIV FCDGCNTPFH QLCHEPYISD ELLDSPNGEW FCDDCIRRKK QAPLVTGTTA 300
  301 RELNLSSEEK KSYLLSLPIS QLVDILLFCE QLHPDIPFYS PKTSTIVQEL QSKRSAFTAT 360
  361 MNEPVTGDQY LSLNNGTESQ SKTTKHSTSL PSTEPVEVDK QYMESEKIPT IDEYLQEYSN 420
  421 EDEIVLQVLE SFPAAVSFST ITNTIQAKYS NRKIKNSNIT RSLNRLVRKN RVLRDARGSS 480
  481 YELNRTFDAD RPSVRPDISI TGPIPIDWML YTPHTEDLTE NFCTYYMFDE TPIVLSSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] MSA 16.374997 View MSA. No confident structure predictions are available.
    2 View Details [217..394] PSI-BLAST 11.0 No description for 2f6jA was found.
    3 View Details [395..538] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle