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Protein Overview: SPAC13G6.10c

General Information:
Name(s) found: SPAC13G6.10c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • O-glucosyl hydrolase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 530 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    cell surface [NASLink to PubMed article]
    Biological Process: extracellular polysaccharide metabolic process [IC]
    cellular catabolic process [NAS]
    Molecular Function: cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTTFATVAL AFLSTVGALP YAPNHRHHRR DDDGVLTVYE TILETVYVTA VPGANSSSSY  60
   61 TSYSTGLASV TESSDDGAST ALPTTSTESV VVTTSAPAAS SSATSYPATF VSTPLYTMDN 120
  121 VTAPVWSNTS VPVSTPETSA TSSSEFFTSY PATSSESSSS YPASSTEVAS SYSASSTEVT 180
  181 SSYPASSEVA TSTSSYVAPV SSSVASSSEI SAGSATSYVP TSSSSIALSS VVASASVSAA 240
  241 NKGVSTPAVS SAAASSSAVV SSVVSSATSV AASSTISSAT SSSASASPTS SSVSGKRGLA 300
  301 WIPGTDLGYS DNFVNKGINW YYNWGSYSSG LSSSFEYVLN QHDANSLSSA SSVFTGGATV 360
  361 IGFNEPDLSA AGNPIDAATA ASYYLQYLTP LRESGAIGYL GSPAISNVGE DWLSEFMSAC 420
  421 SDCKIDFIAC HWYGIDFSNL QDYINSLANY GLPIWLTEFA CTNWDDSNLP SLDEVKTLMT 480
  481 SALGFLDGHG SVERYSWFAP ATELGAGVGN NNALISSSGG LSEVGEIYIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] MSA 5.165996 View MSA. No confident structure predictions are available.
    2 View Details [151..303] MSA 5.165989 View MSA. No confident structure predictions are available.
    3 View Details [304..530] PSI-BLAST 41.522879 Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle