Protein Overview: brf1

General Information:
Name(s) found:	brf1 / SPBC13E7.10c [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	gi\|7688330\|emb\|CAB89885.1\| transcription factor TFIIIB complex subunit Brf1 [Schizosaccharomyces pombe] [NCBI NR] gi\|30913367\|sp\|Q9P6R0.1\|TF3B_SCHPO RecName: Full=Transcription factor IIIB 60 kDa subunit; Short=TFIIIB; AltName: Full=B-related factor 1; Short=BRF-1; AltName: Full=TFIIB-related factor [NCBI NR] gi\|19113057\|ref\|NP_596265.1\| transcription factor TFIIIB complex subunit Brf1 [Schizosaccharomyces pombe] [NCBI NR] transcription factor TFIIIB complex subunit Brf1 [Sanger Pombe] Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe GN=brf1 PE=1 SV=1 [Swiss-Prot] PUTATIVE TRANSCRIPTION FACTOR TFIIIB SUBUNIT; B- RELATED FACTOR; SIMILAR TO S. CEREVISIE BRF1 PUTATIVE TRANSCRIPTION FACTOR TFIIIB SUBUNIT; B- RELATED FACTOR; SIMILAR TO S. CEREVISIAE BRF1: Q9P6R0;Q9USU4; [pompepVF.fasta] PUTATIVE TRANSCRIPTION FACTOR IIIB (TFIIIB) SUBUNIT; B-RELATED FACTOR; BRF: Q9P6R0;Q9USU4; [pompepV13] Transcription factor IIIB 60 kDa subunit (TFIIIB) (B-related factor) (BRF) (TFIIB-related factor) [pompep4896] \|\|SPBC30D10.20\|putative transcription factor TFIIIB subunit [pompepnew.fasta] \|brf1\|SPBC30D10.20\|transcription factor TFIIIB complex (PMID 12682361)\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [pombe041504.fasta] transcription factor iiib 70 kd subunit [Schizosaccharomyces pombe]gi\|7688330\|emb\|CAB89885.1\| SPBC13E7.10c [Schizosaccharomyces pombe]gi\|30913367\|sp\|Q9P6R0\|TF3B_SCHPO Transcription factor IIIB 60 kDa subunit (TFIIIB) (B-related factor) (BRF) (TFIIB-rela [nrdb_11152004_Chlamydomonas] \|brf1\|SPBC30D10.20\|transcription factor TFIIIB complex \|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [pompep2242005.fasta] (Q9P6R0) Transcription factor IIIB 60 kDa subunit (TFIIIB) (B-related factor) (BRF) (TFIIB-related factor) [pompep4896_normal_reversed] \|brf1\|SPBC30D10.20\|transcription factor TFIIIB complex subunit Brf1\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] SPBC13E7.10c [Schizosaccharomyces pombe] [nr-271106-contam.fasta] hypothetical protein SPBC13E7.10c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
Organism:	Schizosaccharomyces pombe
Length:	500 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] transcription factor TFIIIB complex [IDA]
Biological Process:	transcription initiation from RNA polymerase III promoter [TAS]
Molecular Function:	zinc ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCFQLFAMG CPNCGSTTFE SDTASGNTYC TQCGVVVEQD AIVSEVTFGE ASTGAAVVQG  60
   61 SLVSNDQTHA RTFGGPYRNQ GSVESRELTI ANGRRRISAL AIALKLNERH IEAAVRYFTL 120
  121 AINNNFIKGR RSQYVVASCL YIVCRISKTS HMLIDFSDIL QINVFKLGST FLKLCRVLRP 180
  181 NLPLLDPSLY ISRFASLLEF GPETHRVAND AIRLVARMNR DWMQIGRRPA GICGACLLIA 240
  241 ARMNNFRRSV REVVHVVKVA DITIQKRLDE FKLTESGDLS IADFRNIWLE GQSDPPSFTK 300
  301 NQKFQQYGAQ KVSNIDHTQE YMSPIKRTPD FDGNEVKSEE LSQTVKVESQ ETPVHLKADE 360
  361 REIRKEVTET LKGDELRKIS LQVNVKFSEE EVTLEDVDDD EIEDILLDKD EILTKTQVWM 420
  421 ELNKDYLAEE EAKNLKLQED LKKGIVRQPR KRRRYRPRDS TSDGIADTAA ESAKEMMQQR 480
  481 AFSKKINYEA LDMLFDEEQS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..66]	MSA	2.469995	View MSA. No confident structure predictions are available.
2	View Details	[67..282]	PSI-BLAST	51.0	No description for 2b9rA was found.
3	View Details	[283..368]	MSA	2.260992	View MSA. No confident structure predictions are available.
4	View Details	[369..500]	PSI-BLAST	11.045757	TBP-binding domain of the transcription factor IIIb Brf1 subunit

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.72

Protein Overview: brf1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: