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Protein Overview: tfa2

General Information:
Name(s) found: tfa2 / SPCC1672.08c [Sanger Pombe]
Description(s) found:
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  • pir||T41052 transcription initiation factor IIE beta subunit (TFIIE-BETA) - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3451309|emb|CAA20446.1| transcription factor TFIIE beta subunit Tfa2 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|20140557|sp|P79011.2|T2EB_SCHPO RecName: Full=Transcription initiation factor IIE subunit beta; Short=TFIIE-beta [NCBI NR]
  • gi|19075379|ref|NP_587879.1| transcription factor TFIIE beta subunit Tfa2 [Schizosaccharomyces pombe] [NCBI NR]
  • transcription factor TFIIE beta subunit Tfa2 [Sanger Pombe]
  • Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe GN=tfa2 PE=1 SV=2 [Swiss-Prot]
  • TRANSCRIPTION INITIATION FACTOR TFIIE BETA SUBUNIT (TFIIE-BETA): P79011; [pompepVF.fasta]
  • Transcription initiation factor IIE, beta subunit (TFIIE-beta) [pompep4896]
  • |tfa2||transcription initiation factor TFIIE beta subunit [pompepnew.fasta]
  • |tfa2||transcription initiation factor activity|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • transcription initiation factor IIE beta subunit (TFIIE-BETA) [Schizosaccharomyces pombe]gi|3451309|emb|CAA20446.1| tfa2 [Schizosaccharomyces pombe]gi|20140557|sp|P79011|T2EB_SCHPO Transcription initiation factor IIE, beta subunit (TFIIE-beta)gi|749349 [nrdb_11152004_Chlamydomonas]
  • (P79011) Transcription initiation factor IIE, beta subunit (TFIIE-beta) [pompep4896_normal_reversed]
  • |tfa2||transcription factor TFIIE beta subunit Tfa2|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPCp025 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Transcription initiation factor IIE subunit beta (TFIIE-beta) [nr-271106-contam.fasta]
  • SPCC1672.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |tfa2||transcription factor TFIIE beta subunit, TFIIEB, Tfa2|Schizosaccharomyces pombe|chr 3|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tfa2 PE=1 SV=2 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    transcription factor TFIIE complex [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    Biological Process: regulation of transcription [ICLink to PubMed article]
    protein heterotetramerization [IDALink to PubMed article]
    transcription initiation from RNA polymerase II promoter [TASLink to PubMed article]
    Molecular Function: DNA binding [IEA]
    protein binding [IPILink to PubMed article]
    general RNA polymerase II transcription factor activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSDQLSS FKKKVANQPI YAKPQPRQPA SPTPTAYLNS NDGHSSAASS PGSYSLKKKR  60
   61 SKTSLVYSQP ADSGVGTHYL SQLHYAVEYL KERNEPKTAE EIASYLSTPL TPMLLNLLKK 120
  121 NNRIYYDERN ETFTFKPLHN IRSGAGLLAY LDSQKTHVGM SIKELRDGWP NVTVELEELE 180
  181 KQGEVLLLRT RKDGVPKMVW RNDKSCDCHV DKEFQQVWHE IPIPPTLDLA SELGKYGLKP 240
  241 TSVDPSTVKR AGHNQTPKQK KPKTRRGKIT NTHLNILRDY SSMKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 18.0 The central core domain of TFIIE beta
    2 View Details [154..285] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle