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Protein Overview: taf111

General Information:
Name(s) found: taf111 / SPAC2G11.14 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • transcription factor TFIID complex subunit Taf111 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 979 amino acids

    Gene Ontology:
    Cellular Component: transcription factor TFIID complex [ISSLink to PubMed article]
    Biological Process: transcription initiation from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFDGLIVEN ENTKSGYNDG NDLTDLFKQN GTDMSVINSL LGDTNNPGMN ESPKILDSSF  60
   61 ENSNPQDGPN YEDFDFMGSI HKEFGNNINE MDDMEDVSDD NLPEEEQAVN YTGDKDDEDF 120
  121 GKLLAKEMGE EAAGQVLSGV GFSIPSGLVP PSEPSKTVSS TTEELQNEAQ IRESIVKTFF 180
  181 PTFERGVLLN FSELFKPKPV KLAPPKKKTP KVCVPGRLTL EVDTDYAIIF NSKKSLPLKR 240
  241 NVVSPISTHT KKRRRTANTS QRNDGLDLNT VFTTNDWEKN IIYDESDVNK TNQSSFFIDK 300
  301 SLVDIDFAFD ENIFDGDTGT SKVVLNLNDP KLLLQPQLPK KEDSQRSFAD THQRNSLAWK 360
  361 FNISNDPAYE MLKQNHQSKV RNTLSQLAIE HAAFAEKLTF PYYKTRLSKR AVRSYHRPTM 420
  421 SFKPNAAIVF SPLIVRKRSK DKHKSERELI PTTKEITMGD TTHAILVEFS EEHPAVLSNA 480
  481 GMASRIVNYY RKKNEQDESR PKLEVGESHV LDVQDRSPFW NFGSVEPGEI TPTLYNKMIR 540
  541 APLFKHEVPP TDFILIRNSS SYGSKYYLKN INHMFVSGQT FPVTDVPGPH SRKVTTASKN 600
  601 RLKMLVFRLI RRSPNGGLFI RQLSKHFSDQ NEMQIRQRLK EFMEYKKKGD GPGYWKLKSN 660
  661 EVVPDEAGTR SMVSPETVCL LESMQVGVRQ LEDAGYGKTM DEINDDEDEE QPAEQLLAPW 720
  721 ITTRNFINAT QGKAMLTLFG EGDPTGIGEG YSFIRTSMKG GFKPAGETAD DKPEPQTKNA 780
  781 HAYNVAKQQR AYEEEINRIW NAQKRGLSIN NLEELAKKYG INSIHDDYVE SNEETTREET 840
  841 PSSDKVLRIV RLYRDKNGNL ERKQETIHDP IVIHAYLKKR REIDEQSTAL DAVVPTGDEA 900
  901 IDRRNRRRLE QELAKSQKNW ERRRARHAAK EGINLNGEGR KPTTRKCSNC GQVGHMKTNK 960
  961 ICPLFGRPEG GLATMLDKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] deduced N/A No confident structure predictions are available.
    2 View Details [265..318] MSA 1.026996 View MSA. No confident structure predictions are available.
    3 View Details [319..450] deduced N/A No confident structure predictions are available.
    4 View Details [451..562] MSA 2.03798 View MSA. No confident structure predictions are available.
    5 View Details [563..648] MSA 1.039996 View MSA. Confident ab initio structure predictions are available.
    6 View Details [649..825] deduced N/A No confident structure predictions are available.
    7 View Details [826..979] MSA 1.039967 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle