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Protein Overview: mrpl7

General Information:
Name(s) found: mrpl7 / SPBC2F12.02c [Sanger Pombe]
Description(s) found:
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  • gi|7522495|pir||T40138 probable ribosomal protein, mitochondrial - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3219845|sp|O14337.1|RM07_SCHPO RecName: Full=Probable 60S ribosomal protein L7, mitochondrial; Flags: Precursor [NCBI NR]
  • gi|2239233|emb|CAB10151.1| mitochondrial ribosomal protein subunit L7 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112505|ref|NP_595713.1| mitochondrial ribosomal protein subunit L7 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • mitochondrial ribosomal protein subunit L7 [Sanger Pombe]
  • Probable 60S ribosomal protein L7, mitochondrial OS=Schizosaccharomyces pombe GN=mrpl7 PE=2 SV=1 [Swiss-Prot]
  • MITOCHONDRIAL RIBOSOMAL PROTEIN L5/L7: O14337; [pompepVF.fasta]
  • Probable 60S ribosomal protein L7, mitochondrial precursor [pompep4896]
  • |||mitochondrial ribosomal protein L5/L7 [pompepnew.fasta]
  • |||mitochondrial ribosomal protein L5/L7|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • probable mitochondrial 60s ribosomal protein [Schizosaccharomyces pombe]gi|2239233|emb|CAB10151.1| SPBC2F12.02c [Schizosaccharomyces pombe]gi|7522495|pir||T40138 probable ribosomal protein, mitochondrial - fission yeast (Schizosaccharomyces pombe)gi|3 [nrdb_11152004_Chlamydomonas]
  • |mrpl7||mitochondrial ribosomal protein subunit l7|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O14337) Probable 60S ribosomal protein L7, mitochondrial precursor [pompep4896_normal_reversed]
  • |mrpl7||mitochondrial ribosomal protein subunit L7|Schizosaccharomyces pombe|chr 2|||Manual [pombe030305.revfasta]
  • hypothetical protein SPBC2F12.02c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC2F12.02c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |mrpl7||mitochondrial ribosomal protein subunit L7 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Probable 54S ribosomal protein L7, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl7 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: structural constituent of ribosome [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGIRKNIRI SVNFLQRRTI TVKQKLGKNR PLPGWDPNSE YFRPGPTMLN RLQEHLHDTI  60
   61 LPDVLAASYR HDIDTALSTD EHTQKDRLPR WIGDNPYYKN RPPQKMRGNK PLLPVKESVN 120
  121 PKNLPSISKV VVSTMHKEAL VDKTQLLSTM MAFRSITGLQ PEIVYARKDV SPWKLRSGVP 180
  181 VGVKVTLTGE SMYTFLSILS ELVLPQLHDF KGLSPTSGDQ TGNISFGLPS EVMPLFPQIE 240
  241 AVYEMYPHSL PGFNVNITTN SKDTRLARFF VSSLIPFTDG NKEGYVG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] deduced N/A No confident structure predictions are available.
    2 View Details [97..287] PSI-BLAST 72.0 Ribosomal protein L5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.0077098174023 bayes_pls_golite062009
  • structural molecule activity
    		•  9.43117206427219 bayes_pls_golite062009
  • binding
    		•  1.22985833191636 bayes_pls_golite062009
  • protein binding
    		•  0.551360246680731 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle