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Protein Overview: rpl502

General Information:
Name(s) found: rpl502 / SPBC11C11.09c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • 60S ribosomal protein L5 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    cytosolic large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: ribosome biogenesis [ISS]
    translation [ISSLink to PubMed article]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [ISSLink to PubMed article]
    5S rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFIKAVKSS PYFSRYQTKY RRRREGKTDY YARKRLIAQA KNKYNAPKYR LVVRFSNRFV  60
   61 TCQIVSSRVN GDYVLAHAHS SELPRYGIKW GLANWTAAYA TGLLVARRAL AKVGLADKYE 120
  121 GVTEPEGEFE LTEAIEDGPR PFKVFLDVGL KRTSTGSRVF GAMKGASDGG LFIPHSPNRF 180
  181 PGFDIETEEL DDETLRKYIY GGHVAEYMEM LIDDDEERYQ KQFSGLIADG IESDQLEDIY 240
  241 AEAYAKIRED PSFQKSGKDA AAFKAESLKY TQRKLTAEER KERFNAKVIE AGRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 95.522879 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
    2 View Details [226..294] MSA 2.047991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle