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Protein Overview: cdc3

General Information:
Name(s) found: cdc3 / SPAC4A8.15c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • profilin [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 127 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    actomyosin contractile ring [IDALink to PubMed article]
    mating projection [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    actin cortical patch [TASLink to PubMed article]
    Biological Process: cytokinesis, actomyosin contractile ring assembly [IMPLink to PubMed article]
    plasma membrane fusion during cytogamy [IMPLink to PubMed article]
    actin filament polymerization [IMPLink to PubMed article]
    regulation of catalytic activity [ICLink to PubMed article]
    Molecular Function: guanyl-nucleotide exchange factor activity [IDALink to PubMed article]
    actin monomer binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWQAYVDTS LLGTGKIDRA AIVSRAGDSV WAASAGFNLS PQEIQGLAAG FQDPPSMFGT  60
   61 GIILAGQKYI TIRAEGRSIY GKLQKEGIIC VATKLCILVS HYPETTLPGE AAKITEALAD 120
  121 YLVGVGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 41.221849 Profilin (actin-binding protein)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  7.981958446142 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  6.51470611165788 bayes_pls_golite062009
  • actin monomer binding
    		•  3.80837480536839 bayes_pls_golite062009
  • binding
    		•  3.26636517628678 bayes_pls_golite062009
  • phosphatidylinositol-4,5-bisphosphate binding
    		•  3.24248939295046 bayes_pls_golite062009
  • protein binding
    		•  2.14534188091242 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.69872978885701 bayes_pls_golite062009
  • phospholipid binding
    		•  1.52027694872856 bayes_pls_golite062009
  • transporter activity
    		•  1.434681455285 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.23300160340736 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle