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Protein Overview: SPBC1539.03c

General Information:
Name(s) found: SPBC1539.03c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • argininosuccinate lyase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: arginine biosynthetic process [ISSLink to PubMed article]
    arginine biosynthetic process via ornithine [IEA]
    Molecular Function: argininosuccinate lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSQKLWGG RFTGATDPLM TAYNESIHYD KRMFNADIDG SKAYAKALEQ RGIISADELD  60
   61 KMLDGLEAVR DEWKTNKFTL QPSDEDIHTA NERRLGEIIG TGIAGKLHTG RSRNDQVTTD 120
  121 MRLWLRDELD IIQKSLVGLL QVFVARAESD LDIIMPGYTH LQRAQPIRWS HFLLSHAFSI 180
  181 LNDLDRLKQI YSRVNRLPLG AGALAGNPFA VDRKFLQKEL GFEGVIMNSM NAVADRDYVI 240
  241 EFMFWASMVM THISRLAEDL IIYSTSEFNF VTLSDAYSTG SSIMPQKKNP DSLELLRGKS 300
  301 GRVFGNMMGF MVSVKGIPST YNKDLQEDKE PLFDSSKTVL DSIQILTGVL STLTVNPENI 360
  361 AKSLTADMLA TDLAEYLVRK GVPFRETHHI SGSAVRMAEE RNTTIDKLSV EDFKSLHPLY 420
  421 EEDVADVFNY ESSVEKRCAI GGTAKSCVLE QIQTIKKALE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..460] PSI-BLAST 130.0 Argininosuccinate lyase/delta-crystallin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • amidine-lyase activity
    		•  3.84281419858187 bayes_pls_golite062009
  • argininosuccinate lyase activity
    		•  3.58328346705456 bayes_pls_golite062009
  • catalytic activity
    		•  2.51282259572665 bayes_pls_golite062009
  • lyase activity
    		•  2.31268471569846 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  2.2046475419807 bayes_pls_golite062009
  • fumarate hydratase activity
    		•  1.8220456742683 bayes_pls_golite062009
  • histidine ammonia-lyase activity
    		•  0.948129236753279 bayes_pls_golite062009
  • binding
    		•  0.616567403608599 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.491229595527877 bayes_pls_golite062009
  • protein binding
    		•  0.110986062813054 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle