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Protein Overview: FBpp0311835, CG3...

General Information:
Name(s) found: FBpp0311835 [FlyBase]
CG17450-PA / FBpp0070055 [FlyBase]
CG32820-PB / FBpp0070053 [FlyBase]
CG32819-PB / FBpp0070050 [FlyBase]
Description(s) found:
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  • gi|56311466|ref|NP_728439.2| CG17450, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|55380360|gb|AAG22461.3| CG17450, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|24643769|ref|NP_728445.1| CG32819, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24643763|ref|NP_728442.1| CG32820, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22831393|gb|AAN09003.1| CG32819, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22831390|gb|AAN09000.1| CG32820, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|224775825|gb|ACN62421.1| GH11003p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=X:complement(21477122..21477659,21477823..21478410,21478534..21478970); ID=FBpp0311835; name=CG17450-PC; parent=FBgn0040028,FBtr0345920; dbxref=FlyBase:FBpp0311835,FlyBase_Annotation_IDs:CG17450-PC; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17450 (CG17450, FBgn0040028). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:21477059..21479947. It has the cytological map location 20A4. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: microtubule cytoskeleton organization. No alleles are reported. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG32820 (CG32820, FBgn0052820). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:21482818..21486039. It has the cytological map location 20A4. Its molecular function is unknown. The biological processes in which it is involved are not known. No alleles are reported. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG32819 (CG32819, FBgn0052819). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:21488916..21492131. It has the cytological map location 20A4. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: microtubule cytoskeleton organization. No alleles are reported. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG32820-PB translation from_gene[CG32820 CG32820 FBgn0052820] seq_release:3 mol_weight=59110 cds_boundaries:(X:21,284,103..21,285,945[-]) aa_length:520 transcript_info:[CG32820-RB seq_release:3] gene_info:[gene symbol:CG32820 FLAGGED_PROBLEMATIC FBgn0 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG32819-PB translation from_gene[CG32819 CG32819 FBgn0052819] seq_release:3 mol_weight=59110 cds_boundaries:(X:21,290,195..21,292,037[-]) aa_length:520 transcript_info:[CG32819-RB seq_release:3] gene_info:[gene symbol:CG32819 FLAGGED_PROBLEMATIC FBgn0 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8I044) CG32820-PB (CG32819-PB) [DrosMelano7227.FASTAC.txt]
  • CG32819-PB, isoform B [Drosophila melanogaster]gi|22831390|gb|AAN09000.1| CG32820-PB, isoform B [Drosophila melanogaster]gi|55380360|gb|AAG22461.3| CG17450-PA, isoform A [Drosophila melanogaster]gi|24643763|ref|NP_728442.1| CG32820-PB [Drosophila melan [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(21477122..21477659,21477823..21478410,21478534..21478970); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG224 [fly-100309-contam.fasta]
  • type=protein; loc=X:complement(21489309..21489846,21490007..21490594,21490718..21491154); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445, [fly-100309-contam.fasta]
  • type=protein; loc=X:complement(21483217..21483754,21483915..21484502,21484626..21485062); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442, [fly-100309-contam.fasta]
  • CG32820-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG17450-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG32819-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(21477122..21477659,21477823..21478410,21478534..21478970); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(21489309..21489846,21490007..21490594,21490718..21491154); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(21483217..21483754,21483915..21484502,21484626..21485062); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(21477122..21477659,21477823..21478410,21478534..21478970); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:complement(21489309..21489846,21490007..21490594,21490718..21491154); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:complement(21483217..21483754,21483915..21484502,21484626..21485062); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG17450, isoform A OS=Drosophila melanogaster GN=CG32819-RB PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(21477122..21477659,21477823..21478410,21478534..21478970); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(21483217..21483754,21483915..21484502,21484626..21485062); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(21489309..21489846,21490007..21490594,21490718..21491154); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003,FlyMine:FBpp0070050,modMine:FBpp0070050; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0311835; name=CG17450-PC; parent=FBgn0040028,FBtr0345920; dbxref=FlyBase:FBpp0311835,FlyBase_Annotation_IDs:CG17450-PC,GB_protein:AHN59991,REFSEQ:NP_001285521; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(21619691..21620127,21618980..21619567,21618282..21618819)); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003,FlyMine:FBpp0070050,modMine:FBpp0070050; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(21613599..21614035,21612888..21613475,21612190..21612727)); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0311835; name=CG17450-PC; parent=FBgn0040028,FBtr0345920; dbxref=FlyBase:FBpp0311835,FlyBase_Annotation_IDs:CG17450-PC,GB_protein:AHN59991,REFSEQ:NP_001285521; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(join(21619691..21620127,21618980..21619567,21618282..21618819)); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003,FlyMine:FBpp0070050,modMine:FBpp0070050; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:complement(join(21613599..21614035,21612888..21613475,21612190..21612727)); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8I0K9, GH11003p OS=Drosophila melanogaster GN=CG32819-RB PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0070055 type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311835 type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0311835; name=CG17450-PC; parent=FBgn0040028,FBtr0345920; dbxref=FlyBase:FBpp0311835,FlyBase_Annotation_IDs:CG17450-PC,GB_protein:AHN59991,REFSEQ:NP_001285521; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0070050 type=protein; loc=X:complement(join(21619691..21620127,21618980..21619567,21618282..21618819)); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003,FlyMine:FBpp0070050,modMine:FBpp0070050; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0070053 type=protein; loc=X:complement(join(21613599..21614035,21612888..21613475,21612190..21612727)); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(21619691..21620127,21618980..21619567,21618282..21618819)); ID=FBpp0070050; name=CG32819-PB; parent=FBgn0052819,FBtr0070051; dbxref=GB_protein:AAN09003.1,FlyBase:FBpp0070050,FlyBase_Annotation_IDs:CG32819-PB,REFSEQ:NP_728445,GB_protein:AAN09003,UniProt/TrEMBL:Q8I044,FlyMine:FBpp0070050,modMine:FBpp0070050; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0070055; name=CG17450-PA; parent=FBgn0040028,FBtr0070056; dbxref=FlyBase:FBpp0070055,GB_protein:AAG22461.2,FlyBase_Annotation_IDs:CG17450-PA,GB_protein:AAG22461.3,REFSEQ:NP_728439,GB_protein:AAG22461,UniProt/TrEMBL:Q8I044; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(join(21607507..21607943,21606796..21607383,21606095..21606632)); ID=FBpp0311835; name=CG17450-PC; parent=FBgn0040028,FBtr0345920; dbxref=FlyBase:FBpp0311835,FlyBase_Annotation_IDs:CG17450-PC,GB_protein:AHN59991,REFSEQ:NP_001285521,UniProt/TrEMBL:Q8I044; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:complement(join(21613599..21614035,21612888..21613475,21612190..21612727)); ID=FBpp0070053; name=CG32820-PB; parent=FBgn0052820,FBtr0070054; dbxref=FlyBase:FBpp0070053,GB_protein:AAN09000.1,FlyBase_Annotation_IDs:CG32820-PB,REFSEQ:NP_728442,GB_protein:AAN09000,UniProt/TrEMBL:Q8I044; MD5=67f662b1ae173bc8e8bebd7de11c5560; length=520; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 520 amino acids

    Gene Ontology:
    Cellular Component: microtubule [IEA]
    Biological Process: microtubule cytoskeleton organization [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHNGAGLGA GSGGSPIPPT TVMYSQLQPW SQAGAPPCME PVMGPSIPPR VGAAYETPTK  60
   61 HPWRPAMAYE LIQVKHMPEQ PVTNQLTKQC FLPKGMKTDG MIFPNLVTGF DRNPQHAARA 120
  121 ALYTRYTSNE WYNNNMTKYS ESNMNRNLSE RMRNDAVRLM RETDEKATSG QRDAGRRLGE 180
  181 RITDLTFWRN ELNAELEKLI AEMSDINELQ RQCGKALLDL EIPLHIAQEC LFHRESRQGT 240
  241 EKVHDIVEKA LLVEINNLRN SRDRLGGLHE KISKQALDCR GAQHLLEDDV SHKESSLGID 300
  301 SMCHQLNNHS RGITYYGGIE KFDPSVSTQE SWAQASSEHV RRSQAERAKL SQLRSDAQSV 360
  361 VNSVATTVWD FWSNTNNAFD RRSQEMAEAK NRVQLHLQKV QQELFDMEKH LFLLQKAIQD 420
  421 KSGPLKVAQT RLEARSHREG VELCKDHAQD RLVQEVQDIQ GAVETLHHKL MEAEATHQGL 480
  481 LKTRCTLEVD LRNKVNALFI DREKCMSLRR SFPVSNLIKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] deduced N/A No confident structure predictions are available.
    2 View Details [118..520] PSI-BLAST 15.0 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle