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Protein Overview: Obp19b-PA

General Information:
Name(s) found: Obp19b-PA / FBpp0076994 [FlyBase]
Description(s) found:
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  • gi|24158424|ref|NP_608391.2| Odorant-binding protein 19b [Drosophila melanogaster] [NCBI NR]
  • gi|22832662|gb|AAF50909.2| Odorant-binding protein 19b [Drosophila melanogaster] [NCBI NR]
  • gi|17946710|gb|AAL49385.1| RH67410p [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 19b is referred to in FlyBase by the symbol Dmel\Obp19b (CG1670, FBgn0031110). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:20287749..20288836. It has the cytological map location 19D1. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG1670-PA translation from_gene[CG1670 Obp19b FBgn0031110] seq_release:3 mol_weight=18567 cds_boundaries:(X:20,089,543..20,090,466[+]) aa_length:163 transcript_info:[CG1670-RA seq_release:3] gene_info:[gene symbol:Obp19b FBgn0031110 gene_boundaries:(X [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VR95) CG1670 protein (RH67410p) [DrosMelano7227.FASTAC.txt]
  • CG1670-PA [Drosophila melanogaster]gi|17946710|gb|AAL49385.1| RH67410p [Drosophila melanogaster]gi|24158424|ref|NP_608391.2| CG1670-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(20287772..20287955,20288021..20288243,20288614..20288698); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_prote [fly-100309-contam.fasta]
  • CG1670-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 19b CG1670-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RH67410p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(20287772..20287955,20288021..20288243,20288614..20288698); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(20287772..20287955,20288021..20288243,20288614..20288698); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant binding protein 19b OS=Drosophila melanogaster GN=Obp19b PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(20287772..20287955,20288021..20288243,20288614..20288698); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909,FlyMine:FBpp0076994,modMine:FBpp0076994; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(20416745..20416928,20416994..20417216,20417587..20417671); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909,FlyMine:FBpp0076994,modMine:FBpp0076994; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(20416745..20416928,20416994..20417216,20417587..20417671); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909,FlyMine:FBpp0076994,modMine:FBpp0076994; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0076994 type=protein; loc=X:join(20416745..20416928,20416994..20417216,20417587..20417671); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909,FlyMine:FBpp0076994,modMine:FBpp0076994; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(20416745..20416928,20416994..20417216,20417587..20417671); ID=FBpp0076994; name=Obp19b-PA; parent=FBgn0031110,FBtr0077302; dbxref=FlyBase:FBpp0076994,FlyBase_Annotation_IDs:CG1670-PA,GB_protein:AAF50909.2,REFSEQ:NP_608391,GB_protein:AAF50909,UniProt/TrEMBL:Q9VR95,FlyMine:FBpp0076994,modMine:FBpp0076994; MD5=4d6574882b1c555ff903b2067730d041; length=163; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 163 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [NAS]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMQCSRMTTT LKMTNLLLAV ACAAVLMGSA TADEEEGSMT VDEVVELIEP FGDACTPKPS  60
   61 RENIVEMVLN KEDAKHETKC FRHCMLEQFE LMPEDQLQYN EDKTVDMINM MFPDREDDGR 120
  121 RIVKTCNEEL KAEQDKCEAA HGIAMCMLRE MRSSGFKIPE IKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 26.69897 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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